EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0061200 (Gene tree)
Gene ID: 32630
Gene Symbol: Nup153
Alias: -
Full Name: Nucleoporin 153kD
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 11219 bases
Position: chrX:16599241-16610459
Accession: FBgn0061200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0074059	zf-RanBP	PF00641.18	8.8e-39	1	5
FBpp0074059	zf-RanBP	PF00641.18	8.8e-39	2	5
FBpp0074059	zf-RanBP	PF00641.18	8.8e-39	3	5
FBpp0074059	zf-RanBP	PF00641.18	8.8e-39	4	5
FBpp0074059	zf-RanBP	PF00641.18	8.8e-39	5	5
FBpp0288862	zf-RanBP	PF00641.18	8.8e-39	1	5
FBpp0288862	zf-RanBP	PF00641.18	8.8e-39	2	5
FBpp0288862	zf-RanBP	PF00641.18	8.8e-39	3	5
FBpp0288862	zf-RanBP	PF00641.18	8.8e-39	4	5
FBpp0288862	zf-RanBP	PF00641.18	8.8e-39	5	5
FBpp0309144	zf-RanBP	PF00641.18	1e-38	1	5
FBpp0309144	zf-RanBP	PF00641.18	1e-38	2	5
FBpp0309144	zf-RanBP	PF00641.18	1e-38	3	5
FBpp0309144	zf-RanBP	PF00641.18	1e-38	4	5
FBpp0309144	zf-RanBP	PF00641.18	1e-38	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0340158	-	7981	-	FBpp0309144	1929 (aa)	-	A8JV18
FBtr0299587	-	7927	-	FBpp0288862	1883 (aa)	-	Q9VXE6
FBtr0074284	-	7843	-	FBpp0074059	1883 (aa)	-	Q9VXE6

Gene Model

Click here to download FBgn0061200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0061200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0061200	Nup153	52	36.607	ENSBTAG00000017128	NUP153	50	37.281	Bos_taurus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	20174442.	IDA	Component
GO:0005635	nuclear envelope	18562695.	IDA	Component
GO:0005719	nuclear euchromatin	20174442.	IDA	Component
GO:0006325	chromatin organization	20174442.	IMP	Process
GO:0006338	chromatin remodeling	20174442.	IMP	Process
GO:0006355	regulation of transcription, DNA-templated	20174442.	IMP	Process
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006606	protein import into nucleus	17682050.20547758.	IMP	Process
GO:0006607	NLS-bearing protein import into nucleus	17682050.	IMP	Process
GO:0006999	nuclear pore organization	17682050.	IMP	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	17682050.	IMP	Function
GO:0031490	chromatin DNA binding	20174442.	IDA	Function
GO:0034399	nuclear periphery	20174442.	IDA	Component
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0044613	nuclear pore central transport channel	17682050.	IMP	Component
GO:0044615	nuclear pore nuclear basket	21873635.	IBA	Component
GO:0045944	positive regulation of transcription by RNA polymerase II	20174442.	IMP	Process