EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0064117 (Gene tree)
Gene ID: 3772560
Gene Symbol: SLIRP1
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1361 bases
Position: chrX:21317936-21319296
Accession: FBgn0064117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076923	RRM_1	PF00076.22	8.3e-16	1	1
FBpp0076925	RRM_1	PF00076.22	8.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0091704	-	1279	-	FBpp0076923	90 (aa)	-	C4IXV9
FBtr0091703	-	1278	-	FBpp0076925	90 (aa)	-	Q0KHQ1

Gene Model

Click here to download FBgn0064117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0064117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0064117	SLIRP1	100	32.609	FBgn0011206	bol	79	34.211
FBgn0064117	SLIRP1	88	45.570	FBgn0037602	SLIRP2	87	45.570
FBgn0064117	SLIRP1	92	33.333	FBgn0263396	sqd	50	33.333

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function