EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0083976 (Gene tree)
Gene ID: 4379908
Gene Symbol: CG34140
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1903 bases
Position: chr3L:182522-184424
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0110275	PseudoU_synth_1	PF01416.20	1.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0110975	-	1732	-	FBpp0110275	306 (aa)	-	Q0E8K6

Gene Model

Click here to download FBgn0083976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0083976's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0083976	CG34140	98	32.143	ENSG00000169972	PUSL1	96	30.000	Homo_sapiens
FBgn0083976	CG34140	100	32.899	ENSAPOG00000016290	pusl1	94	32.899	Acanthochromis_polyacanthus
FBgn0083976	CG34140	98	31.023	ENSAMEG00000013752	PUSL1	90	31.023	Ailuropoda_melanoleuca
FBgn0083976	CG34140	98	31.894	ENSACIG00000015240	pusl1	100	31.894	Amphilophus_citrinellus
FBgn0083976	CG34140	99	33.333	ENSAOCG00000019419	pusl1	83	33.333	Amphiprion_ocellaris
FBgn0083976	CG34140	100	33.657	ENSAPEG00000005452	pusl1	94	33.442	Amphiprion_percula
FBgn0083976	CG34140	99	33.443	ENSATEG00000024154	pusl1	93	33.443	Anabas_testudineus
FBgn0083976	CG34140	99	33.333	ENSAPLG00000004946	PUSL1	92	33.333	Anas_platyrhynchos
FBgn0083976	CG34140	89	35.294	ENSACAG00000014111	PUSL1	95	35.294	Anolis_carolinensis
FBgn0083976	CG34140	99	33.654	ENSANAG00000037456	PUSL1	91	33.654	Aotus_nancymaae
FBgn0083976	CG34140	99	32.787	ENSACLG00000008675	pusl1	93	32.787	Astatotilapia_calliptera
FBgn0083976	CG34140	99	32.787	ENSAMXG00000044007	pusl1	94	32.787	Astyanax_mexicanus
FBgn0083976	CG34140	98	33.225	ENSBTAG00000007619	PUSL1	93	33.225	Bos_taurus
FBgn0083976	CG34140	99	33.654	ENSCJAG00000010972	PUSL1	91	33.654	Callithrix_jacchus
FBgn0083976	CG34140	86	31.955	ENSCAFG00000019291	PUSL1	79	31.955	Canis_familiaris
FBgn0083976	CG34140	98	31.494	ENSCAFG00020011568	PUSL1	89	31.494	Canis_lupus_dingo
FBgn0083976	CG34140	98	32.899	ENSCHIG00000012615	PUSL1	95	32.899	Capra_hircus
FBgn0083976	CG34140	98	33.333	ENSCPOG00000005149	PUSL1	89	33.333	Cavia_porcellus
FBgn0083976	CG34140	99	33.333	ENSCCAG00000027475	PUSL1	91	33.333	Cebus_capucinus
FBgn0083976	CG34140	98	32.781	ENSCATG00000018260	PUSL1	90	32.781	Cercocebus_atys
FBgn0083976	CG34140	98	31.475	ENSCLAG00000005232	PUSL1	90	31.475	Chinchilla_lanigera
FBgn0083976	CG34140	98	32.450	ENSCSAG00000000680	PUSL1	90	32.450	Chlorocebus_sabaeus
FBgn0083976	CG34140	99	33.766	ENSCPBG00000022621	PUSL1	95	33.766	Chrysemys_picta_bellii
FBgn0083976	CG34140	98	32.450	ENSCANG00000034373	PUSL1	90	32.450	Colobus_angolensis_palliatus
FBgn0083976	CG34140	98	33.224	ENSCGRG00001012429	Pusl1	93	33.224	Cricetulus_griseus_chok1gshd
FBgn0083976	CG34140	98	33.224	ENSCGRG00000006466	Pusl1	93	33.224	Cricetulus_griseus_crigri
FBgn0083976	CG34140	99	35.738	ENSCSEG00000005159	pusl1	93	35.738	Cynoglossus_semilaevis
FBgn0083976	CG34140	99	32.686	ENSDARG00000074565	pusl1	96	32.573	Danio_rerio
FBgn0083976	CG34140	98	32.566	ENSECAG00000006248	PUSL1	89	32.566	Equus_caballus
FBgn0083976	CG34140	98	33.000	ENSEEUG00000000837	PUSL1	93	33.000	Erinaceus_europaeus
FBgn0083976	CG34140	99	32.248	ENSELUG00000015945	pusl1	95	32.248	Esox_lucius
FBgn0083976	CG34140	98	32.343	ENSFCAG00000007617	PUSL1	90	32.343	Felis_catus
FBgn0083976	CG34140	99	35.082	ENSFHEG00000006370	pusl1	93	35.082	Fundulus_heteroclitus
FBgn0083976	CG34140	99	32.792	ENSGMOG00000019388	pusl1	98	32.792	Gadus_morhua
FBgn0083976	CG34140	99	34.091	ENSGALG00000001714	PUSL1	96	34.091	Gallus_gallus
FBgn0083976	CG34140	99	33.115	ENSGAFG00000007546	pusl1	95	33.115	Gambusia_affinis
FBgn0083976	CG34140	99	33.443	ENSGACG00000007848	pusl1	92	33.443	Gasterosteus_aculeatus
FBgn0083976	CG34140	99	33.766	ENSGAGG00000004730	PUSL1	95	33.766	Gopherus_agassizii
FBgn0083976	CG34140	80	32.661	ENSGGOG00000005364	PUSL1	87	33.333	Gorilla_gorilla
FBgn0083976	CG34140	99	33.115	ENSHBUG00000001264	pusl1	93	33.115	Haplochromis_burtoni
FBgn0083976	CG34140	98	33.553	ENSHGLG00000017570	PUSL1	90	33.553	Heterocephalus_glaber_female
FBgn0083976	CG34140	93	33.564	ENSHGLG00100007641	PUSL1	84	33.564	Heterocephalus_glaber_male
FBgn0083976	CG34140	99	34.653	ENSHCOG00000010077	pusl1	100	34.323	Hippocampus_comes
FBgn0083976	CG34140	99	32.353	ENSIPUG00000023921	pusl1	95	32.353	Ictalurus_punctatus
FBgn0083976	CG34140	98	31.229	ENSSTOG00000001783	PUSL1	85	31.788	Ictidomys_tridecemlineatus
FBgn0083976	CG34140	99	32.803	ENSJJAG00000020471	Pusl1	94	32.803	Jaculus_jaculus
FBgn0083976	CG34140	89	35.165	ENSKMAG00000005154	pusl1	85	35.165	Kryptolebias_marmoratus
FBgn0083976	CG34140	100	34.202	ENSLBEG00000013469	pusl1	96	34.202	Labrus_bergylta
FBgn0083976	CG34140	69	32.710	ENSLACG00000018795	PUSL1	95	32.710	Latimeria_chalumnae
FBgn0083976	CG34140	99	34.323	ENSLOCG00000002210	pusl1	94	34.098	Lepisosteus_oculatus
FBgn0083976	CG34140	93	31.834	ENSLAFG00000013685	PUSL1	95	31.834	Loxodonta_africana
FBgn0083976	CG34140	98	32.450	ENSMFAG00000046288	PUSL1	90	32.450	Macaca_fascicularis
FBgn0083976	CG34140	98	32.143	ENSMNEG00000037989	PUSL1	90	32.143	Macaca_nemestrina
FBgn0083976	CG34140	99	32.787	ENSMAMG00000016538	pusl1	92	32.787	Mastacembelus_armatus
FBgn0083976	CG34140	99	32.787	ENSMZEG00005026990	pusl1	93	32.787	Maylandia_zebra
FBgn0083976	CG34140	99	33.766	ENSMGAG00000003037	PUSL1	95	33.766	Meleagris_gallopavo
FBgn0083976	CG34140	98	32.895	ENSMAUG00000019924	Pusl1	93	32.895	Mesocricetus_auratus
FBgn0083976	CG34140	98	31.579	ENSMICG00000014171	PUSL1	92	31.579	Microcebus_murinus
FBgn0083976	CG34140	98	32.333	ENSMOCG00000005602	Pusl1	93	32.333	Microtus_ochrogaster
FBgn0083976	CG34140	99	32.680	ENSMMOG00000003269	pusl1	99	32.680	Mola_mola
FBgn0083976	CG34140	99	34.426	ENSMALG00000021686	pusl1	92	34.426	Monopterus_albus
FBgn0083976	CG34140	98	32.226	MGP_CAROLIEiJ_G0026911	Pusl1	93	32.226	Mus_caroli
FBgn0083976	CG34140	98	31.229	ENSMUSG00000051557	Pusl1	93	31.229	Mus_musculus
FBgn0083976	CG34140	98	32.890	MGP_PahariEiJ_G0029260	Pusl1	93	32.890	Mus_pahari
FBgn0083976	CG34140	98	31.561	MGP_SPRETEiJ_G0027906	Pusl1	93	31.561	Mus_spretus
FBgn0083976	CG34140	98	32.343	ENSMPUG00000014313	PUSL1	90	32.343	Mustela_putorius_furo
FBgn0083976	CG34140	84	32.171	ENSNBRG00000014762	pusl1	86	32.171	Neolamprologus_brichardi
FBgn0083976	CG34140	88	33.579	ENSNLEG00000000051	PUSL1	89	33.579	Nomascus_leucogenys
FBgn0083976	CG34140	81	30.645	ENSMEUG00000005176	-	89	30.645	Notamacropus_eugenii
FBgn0083976	CG34140	98	33.667	ENSMEUG00000011649	-	96	33.882	Notamacropus_eugenii
FBgn0083976	CG34140	98	33.226	ENSODEG00000008247	PUSL1	88	33.226	Octodon_degus
FBgn0083976	CG34140	99	33.770	ENSONIG00000019361	pusl1	93	33.003	Oreochromis_niloticus
FBgn0083976	CG34140	99	33.770	ENSORLG00000016228	pusl1	94	33.770	Oryzias_latipes
FBgn0083976	CG34140	99	33.115	ENSORLG00020013710	pusl1	94	33.115	Oryzias_latipes_hni
FBgn0083976	CG34140	99	33.333	ENSORLG00015008715	pusl1	97	33.333	Oryzias_latipes_hsok
FBgn0083976	CG34140	99	32.459	ENSOMEG00000018897	pusl1	96	32.459	Oryzias_melastigma
FBgn0083976	CG34140	98	31.373	ENSOGAG00000031692	PUSL1	95	31.373	Otolemur_garnettii
FBgn0083976	CG34140	93	32.639	ENSOARG00000004905	PUSL1	95	32.639	Ovis_aries
FBgn0083976	CG34140	98	32.792	ENSPPAG00000029283	PUSL1	90	32.792	Pan_paniscus
FBgn0083976	CG34140	98	32.673	ENSPPRG00000023329	PUSL1	90	32.673	Panthera_pardus
FBgn0083976	CG34140	88	33.088	ENSPTIG00000018532	PUSL1	91	33.088	Panthera_tigris_altaica
FBgn0083976	CG34140	98	32.468	ENSPTRG00000000021	PUSL1	90	32.468	Pan_troglodytes
FBgn0083976	CG34140	98	32.450	ENSPANG00000000591	PUSL1	90	32.450	Papio_anubis
FBgn0083976	CG34140	99	32.787	ENSPKIG00000002447	pusl1	96	32.787	Paramormyrops_kingsleyae
FBgn0083976	CG34140	89	35.018	ENSPSIG00000002781	PUSL1	93	35.018	Pelodiscus_sinensis
FBgn0083976	CG34140	98	33.555	ENSPMGG00000011051	pusl1	99	33.555	Periophthalmus_magnuspinnatus
FBgn0083976	CG34140	98	31.000	ENSPEMG00000013541	Pusl1	93	31.229	Peromyscus_maniculatus_bairdii
FBgn0083976	CG34140	99	33.553	ENSPCIG00000007816	-	63	33.553	Phascolarctos_cinereus
FBgn0083976	CG34140	99	34.098	ENSPFOG00000015448	pusl1	93	33.103	Poecilia_formosa
FBgn0083976	CG34140	99	34.426	ENSPLAG00000004348	pusl1	94	34.426	Poecilia_latipinna
FBgn0083976	CG34140	99	34.426	ENSPMEG00000000931	pusl1	94	34.426	Poecilia_mexicana
FBgn0083976	CG34140	99	34.641	ENSPREG00000002324	pusl1	94	34.641	Poecilia_reticulata
FBgn0083976	CG34140	86	32.453	ENSPPYG00000002014	PUSL1	86	32.453	Pongo_abelii
FBgn0083976	CG34140	64	33.668	ENSPCAG00000002272	PUSL1	73	33.668	Procavia_capensis
FBgn0083976	CG34140	85	32.692	ENSPNYG00000006588	pusl1	98	32.692	Pundamilia_nyererei
FBgn0083976	CG34140	99	32.131	ENSPNAG00000024441	pusl1	96	32.131	Pygocentrus_nattereri
FBgn0083976	CG34140	98	32.781	ENSRNOG00000022354	Pusl1	93	32.781	Rattus_norvegicus
FBgn0083976	CG34140	98	32.781	ENSRBIG00000036842	PUSL1	90	32.781	Rhinopithecus_bieti
FBgn0083976	CG34140	98	32.781	ENSRROG00000030704	PUSL1	90	32.781	Rhinopithecus_roxellana
FBgn0083976	CG34140	95	33.106	ENSSBOG00000032249	PUSL1	93	33.106	Saimiri_boliviensis_boliviensis
FBgn0083976	CG34140	99	32.673	ENSSFOG00015008281	pusl1	91	32.673	Scleropages_formosus
FBgn0083976	CG34140	99	31.803	ENSSMAG00000007187	pusl1	92	31.803	Scophthalmus_maximus
FBgn0083976	CG34140	99	31.579	ENSSDUG00000000287	pusl1	86	31.579	Seriola_dumerili
FBgn0083976	CG34140	99	31.250	ENSSLDG00000009605	pusl1	89	31.250	Seriola_lalandi_dorsalis
FBgn0083976	CG34140	52	36.875	ENSSARG00000005323	-	77	36.875	Sorex_araneus
FBgn0083976	CG34140	99	30.938	ENSSPAG00000002528	pusl1	100	30.363	Stegastes_partitus
FBgn0083976	CG34140	98	32.248	ENSSSCG00000003338	PUSL1	89	32.248	Sus_scrofa
FBgn0083976	CG34140	98	33.333	ENSTGUG00000003214	PUSL1	96	33.333	Taeniopygia_guttata
FBgn0083976	CG34140	99	34.426	ENSTRUG00000010102	pusl1	94	34.426	Takifugu_rubripes
FBgn0083976	CG34140	64	32.143	ENSTNIG00000005789	pusl1	79	32.143	Tetraodon_nigroviridis
FBgn0083976	CG34140	63	30.412	ENSTBEG00000005001	PUSL1	73	30.412	Tupaia_belangeri
FBgn0083976	CG34140	80	32.258	ENSUAMG00000012801	PUSL1	74	32.258	Ursus_americanus
FBgn0083976	CG34140	80	31.855	ENSUMAG00000002084	PUSL1	74	31.855	Ursus_maritimus
FBgn0083976	CG34140	98	31.494	ENSVVUG00000004320	PUSL1	90	30.060	Vulpes_vulpes
FBgn0083976	CG34140	81	34.127	ENSXETG00000011145	pusl1	97	34.127	Xenopus_tropicalis
FBgn0083976	CG34140	99	31.023	ENSXCOG00000017748	pusl1	97	31.023	Xiphophorus_couchianus
FBgn0083976	CG34140	99	32.787	ENSXMAG00000018846	pusl1	94	32.787	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0009982	pseudouridine synthase activity	21873635.	IBA	Function
GO:0031119	tRNA pseudouridine synthesis	21873635.	IBA	Process