EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0085391 (Gene tree)
Gene ID: 43362
Gene Symbol: trv
Alias: -
Full Name: trivet
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 64126 bases
Position: chr3R:28026615-28090740
Accession: FBgn0085391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0306918	RRM_1	PF00076.22	1.2e-35	1	2
FBpp0306918	RRM_1	PF00076.22	1.2e-35	2	2
FBpp0111495	RRM_1	PF00076.22	1.2e-35	1	2
FBpp0111495	RRM_1	PF00076.22	1.2e-35	2	2
FBpp0310624	RRM_1	PF00076.22	1.3e-35	1	2
FBpp0310624	RRM_1	PF00076.22	1.3e-35	2	2
FBpp0306917	RRM_1	PF00076.22	1.3e-35	1	2
FBpp0306917	RRM_1	PF00076.22	1.3e-35	2	2
FBpp0310623	RRM_1	PF00076.22	2.6e-35	1	2
FBpp0310623	RRM_1	PF00076.22	2.6e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0344218	-	2530	-	FBpp0310624	508 (aa)	-	A0A0B4LIU0
FBtr0112583	-	2495	-	FBpp0111495	505 (aa)	-	Q9VAX3
FBtr0334896	-	5991	-	FBpp0306917	509 (aa)	-	A0A0B4KHB5
FBtr0344217	-	2729	-	FBpp0310623	651 (aa)	-	E1JIZ9
FBtr0334897	-	7452	-	FBpp0306918	498 (aa)	-	A0A0B4KH70

Gene Model

Click here to download FBgn0085391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0085391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0085391	trv	68	70.112	FBgn0085383	CG34354	79	68.508

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	19218244.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component