EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0085693 (Gene tree)
Gene ID: 5740411
Gene Symbol: CG41562
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 715 bases
Position: chrX:22251626-22252340
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0112865	RRM_1	PF00076.22	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0114142	-	642	-	FBpp0112865	213 (aa)	-	A8QI32

Gene Model

Click here to download FBgn0085693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0085693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0085693	CG41562	100	99.061	FBgn0085521	CG40813	100	99.061
FBgn0085693	CG41562	72	44.512	FBgn0030085	CG6999	70	43.293
FBgn0085693	CG41562	93	73.659	FBgn0030524	CG10993	100	73.516
FBgn0085693	CG41562	72	45.122	FBgn0052706	CG32706	71	43.902

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000472	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000480	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0034462	small-subunit processome assembly	21873635.	IBA	Process