EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0086129 (Gene tree)
Gene ID: 37857
Gene Symbol: snama
Alias: -
Full Name: something that sticks like glue
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 5411 bases
Position: chr2R:24086604-24092014
Accession: FBgn0086129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0298003	zf-CCHC_2	PF13696.6	4.3e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0307174	-	1972	-	FBpp0298003	494 (aa)	-	D5SHU1
FBtr0072249	-	3936	-	FBpp0072158	1231 (aa)	-	D5SHU1

Gene Model

Click here to download FBgn0086129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0086129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0086129	snama	57	32.288	WBGene00009477	rbpl-1	50	33.696	Caenorhabditis_elegans
FBgn0086129	snama	59	39.820	ENSPFOG00000022154	-	83	39.820	Poecilia_formosa

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	-	ISS	Function
GO:0005575	cellular_component	-	ND	Component
GO:0006511	ubiquitin-dependent protein catabolic process	-	ISS	Process
GO:0006915	apoptotic process	15733535.	IMP	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0008270	zinc ion binding	21912646.	ISM	Function
GO:0035736	cell proliferation involved in compound eye morphogenesis	16547096.	IMP	Process