EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0086130 (Gene tree)
Gene ID: 33254
Gene Symbol: Dbp21E2
Alias: -
Full Name: DEAD box protein 21E2
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1797 bases
Position: chr2L:811584-813380
Accession: FBgn0086130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077674	ResIII	PF04851.15	1.7e-07	1	1
FBpp0077674	DEAD	PF00270.29	1.1e-37	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078009	-	1732	-	FBpp0077674	536 (aa)	-	Q9VPT3

Gene Model

Click here to download FBgn0086130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0086130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0086130	Dbp21E2	67	30.894	FBgn0032919	CG9253	67	30.894
FBgn0086130	Dbp21E2	69	31.536	FBgn0283442	vas	54	31.536
FBgn0086130	Dbp21E2	67	30.000	FBgn0015331	abs	57	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0086130	Dbp21E2	87	35.041	ENSG00000182810	DDX28	88	35.185	Homo_sapiens
FBgn0086130	Dbp21E2	84	35.714	ENSAPOG00000000991	ddx28	81	35.931	Acanthochromis_polyacanthus
FBgn0086130	Dbp21E2	88	34.765	ENSAMEG00000019426	DDX28	89	34.908	Ailuropoda_melanoleuca
FBgn0086130	Dbp21E2	82	37.473	ENSACIG00000021615	ddx28	80	37.336	Amphilophus_citrinellus
FBgn0086130	Dbp21E2	84	36.501	ENSAOCG00000004610	ddx28	81	36.717	Amphiprion_ocellaris
FBgn0086130	Dbp21E2	84	36.501	ENSAPEG00000002143	ddx28	81	36.717	Amphiprion_percula
FBgn0086130	Dbp21E2	84	36.304	ENSATEG00000018691	ddx28	82	36.522	Anabas_testudineus
FBgn0086130	Dbp21E2	88	36.232	ENSACAG00000009755	DDX28	84	36.184	Anolis_carolinensis
FBgn0086130	Dbp21E2	82	34.868	ENSACLG00000012984	ddx28	79	34.868	Astatotilapia_calliptera
FBgn0086130	Dbp21E2	85	34.440	ENSAMXG00000005878	ddx28	83	35.073	Astyanax_mexicanus
FBgn0086130	Dbp21E2	87	33.678	ENSBTAG00000004290	DDX28	87	33.817	Bos_taurus
FBgn0086130	Dbp21E2	86	35.477	ENSCAFG00000020327	DDX28	89	35.625	Canis_familiaris
FBgn0086130	Dbp21E2	86	35.477	ENSCAFG00020019785	DDX28	89	35.625	Canis_lupus_dingo
FBgn0086130	Dbp21E2	87	33.058	ENSCHIG00000009658	DDX28	87	33.195	Capra_hircus
FBgn0086130	Dbp21E2	87	35.391	ENSCPOG00000013746	DDX28	88	35.537	Cavia_porcellus
FBgn0086130	Dbp21E2	87	35.041	ENSCSAG00000018472	DDX28	87	35.185	Chlorocebus_sabaeus
FBgn0086130	Dbp21E2	94	33.654	ENSCPBG00000012105	DDX28	83	35.084	Chrysemys_picta_bellii
FBgn0086130	Dbp21E2	66	36.740	ENSCSAVG00000006341	-	94	36.740	Ciona_savignyi
FBgn0086130	Dbp21E2	84	35.106	ENSCGRG00001024412	Ddx28	87	35.256	Cricetulus_griseus_chok1gshd
FBgn0086130	Dbp21E2	82	35.556	ENSCSEG00000011651	ddx28	79	35.556	Cynoglossus_semilaevis
FBgn0086130	Dbp21E2	87	35.391	ENSCVAG00000004044	ddx28	80	36.726	Cyprinodon_variegatus
FBgn0086130	Dbp21E2	82	33.917	ENSDARG00000060411	ddx28	84	33.684	Danio_rerio
FBgn0086130	Dbp21E2	65	38.356	ENSDNOG00000033593	DDX28	98	38.356	Dasypus_novemcinctus
FBgn0086130	Dbp21E2	87	34.227	ENSDORG00000028868	Ddx28	87	34.728	Dipodomys_ordii
FBgn0086130	Dbp21E2	86	35.699	ENSETEG00000001062	-	87	35.849	Echinops_telfairi
FBgn0086130	Dbp21E2	87	33.814	ENSEASG00005020387	DDX28	88	33.954	Equus_asinus_asinus
FBgn0086130	Dbp21E2	87	34.227	ENSECAG00000006451	DDX28	88	34.369	Equus_caballus
FBgn0086130	Dbp21E2	67	32.533	ENSEEUG00000005017	DDX28	86	32.708	Erinaceus_europaeus
FBgn0086130	Dbp21E2	82	36.364	ENSELUG00000005302	ddx28	86	36.463	Esox_lucius
FBgn0086130	Dbp21E2	88	34.783	ENSFCAG00000012858	DDX28	88	34.927	Felis_catus
FBgn0086130	Dbp21E2	82	35.698	ENSFHEG00000012573	ddx28	81	35.698	Fundulus_heteroclitus
FBgn0086130	Dbp21E2	82	35.667	ENSGMOG00000017045	ddx28	86	35.667	Gadus_morhua
FBgn0086130	Dbp21E2	86	32.851	ENSGALG00000048700	DDX28	82	34.298	Gallus_gallus
FBgn0086130	Dbp21E2	87	35.438	ENSGAFG00000009249	ddx28	80	36.383	Gambusia_affinis
FBgn0086130	Dbp21E2	86	36.175	ENSGACG00000016367	ddx28	87	36.326	Gasterosteus_aculeatus
FBgn0086130	Dbp21E2	77	35.867	ENSGAGG00000004565	DDX28	92	35.867	Gopherus_agassizii
FBgn0086130	Dbp21E2	87	35.246	ENSGGOG00000001220	DDX28	88	35.391	Gorilla_gorilla
FBgn0086130	Dbp21E2	82	37.500	ENSHBUG00000001016	ddx28	80	37.500	Haplochromis_burtoni
FBgn0086130	Dbp21E2	87	35.845	ENSHCOG00000017590	ddx28	85	36.175	Hippocampus_comes
FBgn0086130	Dbp21E2	83	34.115	ENSIPUG00000017350	Ddx28	81	34.115	Ictalurus_punctatus
FBgn0086130	Dbp21E2	87	33.469	ENSSTOG00000002064	DDX28	88	33.607	Ictidomys_tridecemlineatus
FBgn0086130	Dbp21E2	82	34.273	ENSJJAG00000012460	-	83	34.273	Jaculus_jaculus
FBgn0086130	Dbp21E2	88	35.903	ENSKMAG00000018183	ddx28	83	36.117	Kryptolebias_marmoratus
FBgn0086130	Dbp21E2	82	36.585	ENSLBEG00000006072	ddx28	80	36.585	Labrus_bergylta
FBgn0086130	Dbp21E2	86	37.740	ENSLACG00000005578	DDX28	81	37.687	Latimeria_chalumnae
FBgn0086130	Dbp21E2	86	34.947	ENSLOCG00000017604	ddx28	84	34.947	Lepisosteus_oculatus
FBgn0086130	Dbp21E2	86	34.519	ENSLAFG00000031239	DDX28	87	34.664	Loxodonta_africana
FBgn0086130	Dbp21E2	87	34.836	ENSMMUG00000010836	DDX28	87	34.979	Macaca_mulatta
FBgn0086130	Dbp21E2	84	36.170	ENSMAMG00000020220	ddx28	82	36.170	Mastacembelus_armatus
FBgn0086130	Dbp21E2	82	37.281	ENSMZEG00005009292	ddx28	80	37.281	Maylandia_zebra
FBgn0086130	Dbp21E2	87	34.774	ENSMOCG00000009815	Ddx28	88	34.917	Microtus_ochrogaster
FBgn0086130	Dbp21E2	88	34.845	ENSMMOG00000000270	ddx28	81	35.778	Mola_mola
FBgn0086130	Dbp21E2	86	35.908	ENSMODG00000005303	DDX28	86	36.059	Monodelphis_domestica
FBgn0086130	Dbp21E2	93	35.849	ENSMALG00000008864	ddx28	83	37.107	Monopterus_albus
FBgn0086130	Dbp21E2	87	33.811	MGP_CAROLIEiJ_G0031510	Ddx28	88	33.951	Mus_caroli
FBgn0086130	Dbp21E2	87	33.402	ENSMUSG00000045538	Ddx28	88	33.539	Mus_musculus
FBgn0086130	Dbp21E2	87	34.016	MGP_PahariEiJ_G0023110	Ddx28	87	34.511	Mus_pahari
FBgn0086130	Dbp21E2	87	33.402	MGP_SPRETEiJ_G0032628	Ddx28	88	33.539	Mus_spretus
FBgn0086130	Dbp21E2	66	38.292	ENSMPUG00000006915	DDX28	90	38.292	Mustela_putorius_furo
FBgn0086130	Dbp21E2	87	35.197	ENSMLUG00000005899	DDX28	87	35.343	Myotis_lucifugus
FBgn0086130	Dbp21E2	86	33.750	ENSNGAG00000015762	Ddx28	87	33.891	Nannospalax_galili
FBgn0086130	Dbp21E2	82	37.037	ENSNBRG00000001337	ddx28	81	37.037	Neolamprologus_brichardi
FBgn0086130	Dbp21E2	82	37.118	ENSONIG00000020597	ddx28	80	36.842	Oreochromis_niloticus
FBgn0086130	Dbp21E2	50	38.489	ENSOANG00000003551	-	97	38.489	Ornithorhynchus_anatinus
FBgn0086130	Dbp21E2	86	34.728	ENSOCUG00000023074	DDX28	87	34.874	Oryctolagus_cuniculus
FBgn0086130	Dbp21E2	82	37.418	ENSORLG00000011968	ddx28	81	37.418	Oryzias_latipes
FBgn0086130	Dbp21E2	84	37.045	ENSORLG00020001951	ddx28	84	37.045	Oryzias_latipes_hni
FBgn0086130	Dbp21E2	82	37.637	ENSORLG00015023030	ddx28	82	37.637	Oryzias_latipes_hsok
FBgn0086130	Dbp21E2	88	35.497	ENSOMEG00000012445	ddx28	80	36.184	Oryzias_melastigma
FBgn0086130	Dbp21E2	88	34.845	ENSOGAG00000016895	DDX28	88	34.990	Otolemur_garnettii
FBgn0086130	Dbp21E2	81	31.556	ENSOARG00000003313	DDX28	99	31.556	Ovis_aries
FBgn0086130	Dbp21E2	87	33.264	ENSPPAG00000036971	DDX28	87	33.402	Pan_paniscus
FBgn0086130	Dbp21E2	88	34.783	ENSPPRG00000018322	DDX28	88	34.927	Panthera_pardus
FBgn0086130	Dbp21E2	84	35.065	ENSPTIG00000006444	DDX28	86	35.065	Panthera_tigris_altaica
FBgn0086130	Dbp21E2	87	35.246	ENSPTRG00000008258	DDX28	88	35.391	Pan_troglodytes
FBgn0086130	Dbp21E2	82	35.965	ENSPKIG00000021200	ddx28	83	35.965	Paramormyrops_kingsleyae
FBgn0086130	Dbp21E2	52	38.028	ENSPSIG00000001127	DDX28	94	38.028	Pelodiscus_sinensis
FBgn0086130	Dbp21E2	81	35.570	ENSPMGG00000007908	ddx28	79	35.570	Periophthalmus_magnuspinnatus
FBgn0086130	Dbp21E2	87	32.992	ENSPEMG00000003395	Ddx28	88	33.196	Peromyscus_maniculatus_bairdii
FBgn0086130	Dbp21E2	51	38.869	ENSPMAG00000006983	DDX28	94	38.869	Petromyzon_marinus
FBgn0086130	Dbp21E2	87	37.247	ENSPFOG00000020838	DDX28	80	38.312	Poecilia_formosa
FBgn0086130	Dbp21E2	87	37.247	ENSPFOG00000020952	ddx28	79	38.312	Poecilia_formosa
FBgn0086130	Dbp21E2	87	37.045	ENSPLAG00000016292	ddx28	79	38.095	Poecilia_latipinna
FBgn0086130	Dbp21E2	87	37.247	ENSPMEG00000011311	ddx28	78	38.312	Poecilia_mexicana
FBgn0086130	Dbp21E2	87	37.247	ENSPREG00000002899	ddx28	79	38.312	Poecilia_reticulata
FBgn0086130	Dbp21E2	87	34.836	ENSPPYG00000007481	DDX28	88	34.979	Pongo_abelii
FBgn0086130	Dbp21E2	87	34.783	ENSPCOG00000024632	DDX28	87	35.294	Propithecus_coquereli
FBgn0086130	Dbp21E2	82	36.645	ENSPNYG00000018804	ddx28	80	36.645	Pundamilia_nyererei
FBgn0086130	Dbp21E2	85	34.468	ENSPNAG00000014597	ddx28	90	33.947	Pygocentrus_nattereri
FBgn0086130	Dbp21E2	87	33.951	ENSRNOG00000019817	Ddx28	88	33.884	Rattus_norvegicus
FBgn0086130	Dbp21E2	86	34.232	ENSSFOG00015010181	ddx28	86	34.447	Scleropages_formosus
FBgn0086130	Dbp21E2	82	36.443	ENSSMAG00000006831	ddx28	84	36.443	Scophthalmus_maximus
FBgn0086130	Dbp21E2	84	36.989	ENSSDUG00000003257	ddx28	82	37.204	Seriola_dumerili
FBgn0086130	Dbp21E2	84	36.989	ENSSLDG00000004513	ddx28	82	36.989	Seriola_lalandi_dorsalis
FBgn0086130	Dbp21E2	88	32.389	ENSSARG00000014169	DDX28	88	33.264	Sorex_araneus
FBgn0086130	Dbp21E2	84	36.069	ENSSPAG00000000988	ddx28	82	36.069	Stegastes_partitus
FBgn0086130	Dbp21E2	87	34.021	ENSSSCG00000026038	DDX28	88	34.161	Sus_scrofa
FBgn0086130	Dbp21E2	82	35.794	ENSTRUG00000007815	ddx28	81	35.794	Takifugu_rubripes
FBgn0086130	Dbp21E2	82	35.412	ENSTNIG00000011352	ddx28	89	35.412	Tetraodon_nigroviridis
FBgn0086130	Dbp21E2	73	38.318	ENSTBEG00000017695	DDX28	69	38.140	Tupaia_belangeri
FBgn0086130	Dbp21E2	88	34.568	ENSUAMG00000016116	DDX28	88	34.711	Ursus_americanus
FBgn0086130	Dbp21E2	70	37.755	ENSUMAG00000019200	DDX28	79	37.755	Ursus_maritimus
FBgn0086130	Dbp21E2	73	32.775	ENSVVUG00000012876	DDX28	80	32.933	Vulpes_vulpes
FBgn0086130	Dbp21E2	90	32.317	ENSXETG00000005435	ddx28	95	32.317	Xenopus_tropicalis
FBgn0086130	Dbp21E2	87	36.585	ENSXCOG00000012364	ddx28	80	37.609	Xiphophorus_couchianus
FBgn0086130	Dbp21E2	87	36.789	ENSXMAG00000019603	ddx28	82	37.826	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	22794106.	IDA	Component