EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0086357 (Gene tree)
Gene ID: 33905
Gene Symbol: Sec61alpha
Alias: -
Full Name: Sec61 alpha subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3394
Position: chr2L: 6477182-6480575
Accession: FBgn0086357
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0345753	-	2128	-	FBpp0311774	476 (aa)	-	F0JAP1
FBtr0079266	-	2019	-	FBpp0078896	476 (aa)	-	Q8STG9

Gene Model

Click here to download FBgn0086357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0086357's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0086357	Sec61alpha	100	89.286	ENSG00000058262	SEC61A1	100	94.059	Homo_sapiens
FBgn0086357	Sec61alpha	100	89.286	ENSMUSG00000030082	Sec61a1	100	89.286	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005048	signal sequence binding	21873635.	IBA	Function
GO:0005783	endoplasmic reticulum	25294944.	HDA	Component
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005784	Sec61 translocon complex	21873635.	IBA	Component
GO:0005789	endoplasmic reticulum membrane	21873635.	IBA	Component
GO:0005791	rough endoplasmic reticulum	17327273.	IDA	Component
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0006620	posttranslational protein targeting to endoplasmic reticulum membrane	21873635.	IBA	Process
GO:0007391	dorsal closure	14668390.20112345.	IMP	Process
GO:0008258	head involution	14668390.	IMP	Process
GO:0008320	protein transmembrane transporter activity	21873635.	IBA	Function
GO:0010507	negative regulation of autophagy	19562034.	IMP	Process
GO:0010942	positive regulation of cell death	16243437.	IMP	Process
GO:0012505	endomembrane system	19317464.	HDA	Component
GO:0034761	positive regulation of iron ion transmembrane transport	24332855.	IMP	Process
GO:0042335	cuticle development	14668390.	IMP	Process
GO:0045169	fusome	18355804.	IDA	Component
GO:0046598	positive regulation of viral entry into host cell	24332855.	IMP	Process
GO:0098586	cellular response to virus	24332855.	IMP	Process