EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0086675 (Gene tree)
Gene ID
32245
Gene Symbol
fne
Alias
-
Full Name
found in neurons
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
32941 bases
Position
chrX:12917477-12950417
Accession
FBgn0086675
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0073543RRM_5PF13893.63.2e-0911
FBpp0112400RRM_5PF13893.63.2e-0911
FBpp0297664RRM_5PF13893.63.2e-0911
FBpp0300900RRM_5PF13893.63.2e-0911
FBpp0305511RRM_5PF13893.63.2e-0911
FBpp0305512RRM_5PF13893.63.2e-0911
FBpp0297665RRM_5PF13893.61.2e-0811
FBpp0310243RRM_5PF13893.61.2e-0811
FBpp0310244RRM_5PF13893.61.2e-0811
FBpp0073543RRM_1PF00076.225.6e-5914
FBpp0073543RRM_1PF00076.225.6e-5924
FBpp0073543RRM_1PF00076.225.6e-5934
FBpp0073543RRM_1PF00076.225.6e-5944
FBpp0112400RRM_1PF00076.225.6e-5914
FBpp0112400RRM_1PF00076.225.6e-5924
FBpp0112400RRM_1PF00076.225.6e-5934
FBpp0112400RRM_1PF00076.225.6e-5944
FBpp0297664RRM_1PF00076.225.6e-5914
FBpp0297664RRM_1PF00076.225.6e-5924
FBpp0297664RRM_1PF00076.225.6e-5934
FBpp0297664RRM_1PF00076.225.6e-5944
FBpp0300900RRM_1PF00076.225.6e-5914
FBpp0300900RRM_1PF00076.225.6e-5924
FBpp0300900RRM_1PF00076.225.6e-5934
FBpp0300900RRM_1PF00076.225.6e-5944
FBpp0305511RRM_1PF00076.225.6e-5914
FBpp0305511RRM_1PF00076.225.6e-5924
FBpp0305511RRM_1PF00076.225.6e-5934
FBpp0305511RRM_1PF00076.225.6e-5944
FBpp0305512RRM_1PF00076.225.6e-5914
FBpp0305512RRM_1PF00076.225.6e-5924
FBpp0305512RRM_1PF00076.225.6e-5934
FBpp0305512RRM_1PF00076.225.6e-5944
FBpp0297665RRM_1PF00076.229.4e-5914
FBpp0297665RRM_1PF00076.229.4e-5924
FBpp0297665RRM_1PF00076.229.4e-5934
FBpp0297665RRM_1PF00076.229.4e-5944
FBpp0310243RRM_1PF00076.229.4e-5914
FBpp0310243RRM_1PF00076.229.4e-5924
FBpp0310243RRM_1PF00076.229.4e-5934
FBpp0310243RRM_1PF00076.229.4e-5944
FBpp0310244RRM_1PF00076.229.4e-5914
FBpp0310244RRM_1PF00076.229.4e-5924
FBpp0310244RRM_1PF00076.229.4e-5934
FBpp0310244RRM_1PF00076.229.4e-5944
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0333320-7579-FBpp0305512356 (aa)-Q9VYI0
FBtr0308694-4682-FBpp0300900356 (aa)-Q9VYI0
FBtr0333319-7113-FBpp0305511356 (aa)-Q9VYI0
FBtr0113493-7321-FBpp0112400356 (aa)-F6JH25
FBtr0073712-3937-FBpp0073543356 (aa)-Q9VYI0
FBtr0306738-8154-FBpp0297664356 (aa)-Q9VYI0
FBtr0306739-8626-FBpp0297665353 (aa)-E1NZB4
FBtr0343650-7653-FBpp0310243353 (aa)-E1NZB4
FBtr0343651-7104-FBpp0310244353 (aa)-E1NZB4
Gene Model
Click here to download FBgn0086675's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0086675's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0086675fne9468.286FBgn0010263Rbp98066.038
FBgn0086675fne5135.000FBgn0038345CG52136635.000
FBgn0086675fne9331.034FBgn0031883Caper5731.034
FBgn0086675fne5839.130FBgn0264270Sxl5741.451
FBgn0086675fne9760.773FBgn0260400elav7461.326
FBgn0086675fne5233.871FBgn0052423shep5033.333
FBgn0086675fne7439.744FBgn0005649Rox86239.744
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0086675fne9761.960ENSG00000107105ELAVL29461.473Homo_sapiens
FBgn0086675fne9960.845ENSAPOG00000022121ELAVL28860.845Acanthochromis_polyacanthus
FBgn0086675fne9761.017ENSAMEG00000007555ELAVL28761.017Ailuropoda_melanoleuca
FBgn0086675fne9961.173ENSACIG00000010855ELAVL29963.609Amphilophus_citrinellus
FBgn0086675fne9960.388ENSAOCG00000019468ELAVL28860.388Amphiprion_ocellaris
FBgn0086675fne9960.388ENSAPEG00000023474ELAVL28860.388Amphiprion_percula
FBgn0086675fne9960.833ENSATEG00000018073ELAVL29660.833Anabas_testudineus
FBgn0086675fne9462.209ENSAPLG00000010429ELAVL28462.209Anas_platyrhynchos
FBgn0086675fne9761.299ENSACAG00000017521ELAVL28161.299Anolis_carolinensis
FBgn0086675fne9761.473ENSANAG00000032553ELAVL29161.473Aotus_nancymaae
FBgn0086675fne9960.388ENSACLG00000002715ELAVL28860.388Astatotilapia_calliptera
FBgn0086675fne9462.209ENSAMXG00000036990ELAVL28362.757Astyanax_mexicanus
FBgn0086675fne9761.960ENSBTAG00000046348ELAVL29461.017Bos_taurus
FBgn0086675fne9761.207ENSCJAG00000008064ELAVL29261.017Callithrix_jacchus
FBgn0086675fne9761.473ENSCAFG00000001688ELAVL28761.473Canis_familiaris
FBgn0086675fne9959.834ENSCAFG00020013836ELAVL29759.834Canis_lupus_dingo
FBgn0086675fne9761.960ENSCHIG00000025894ELAVL29461.473Capra_hircus
FBgn0086675fne9761.207ENSTSYG00000013066ELAVL29161.003Carlito_syrichta
FBgn0086675fne9257.798ENSCAPG00000003609ELAVL29957.798Cavia_aperea
FBgn0086675fne9960.278ENSCPOG00000010472ELAVL29260.278Cavia_porcellus
FBgn0086675fne9761.207ENSCCAG00000024508ELAVL29260.388Cebus_capucinus
FBgn0086675fne9761.473ENSCATG00000012522ELAVL29259.563Cercocebus_atys
FBgn0086675fne9761.207ENSCLAG00000003388ELAVL29061.017Chinchilla_lanigera
FBgn0086675fne9761.473ENSCSAG00000009718ELAVL28761.473Chlorocebus_sabaeus
FBgn0086675fne8765.833ENSCHOG00000000635ELAVL26765.833Choloepus_hoffmanni
FBgn0086675fne9761.538ENSCPBG00000007841ELAVL29461.299Chrysemys_picta_bellii
FBgn0086675fne9455.820ENSCING00000004712-9255.820Ciona_intestinalis
FBgn0086675fne9261.111ENSCSAVG00000003440-9959.763Ciona_savignyi
FBgn0086675fne9761.960ENSCANG00000043179ELAVL29461.473Colobus_angolensis_palliatus
FBgn0086675fne9761.960ENSCGRG00001024409Elavl29361.960Cricetulus_griseus_chok1gshd
FBgn0086675fne9761.960ENSCGRG00000000487Elavl29461.473Cricetulus_griseus_crigri
FBgn0086675fne9960.388ENSCSEG00000006335elavl28860.388Cynoglossus_semilaevis
FBgn0086675fne9961.127ENSCVAG00000013913ELAVL28960.942Cyprinodon_variegatus
FBgn0086675fne9564.535ENSDARG00000040732elavl210062.842Danio_rerio
FBgn0086675fne9761.017ENSDNOG00000035657ELAVL28761.017Dasypus_novemcinctus
FBgn0086675fne9761.473ENSDORG00000010437Elavl29061.473Dipodomys_ordii
FBgn0086675fne9761.756ENSETEG00000006134ELAVL28761.756Echinops_telfairi
FBgn0086675fne7863.380ENSEBUG00000016008elavl29763.380Eptatretus_burgeri
FBgn0086675fne9454.118ENSEBUG00000000352-9854.599Eptatretus_burgeri
FBgn0086675fne9464.095ENSEBUG00000008179-8864.412Eptatretus_burgeri
FBgn0086675fne9761.473ENSEASG00005004697ELAVL28761.473Equus_asinus_asinus
FBgn0086675fne9761.960ENSECAG00000020142ELAVL28961.960Equus_caballus
FBgn0086675fne9750.852ENSEEUG00000008733ELAVL28750.852Erinaceus_europaeus
FBgn0086675fne9960.388ENSELUG00000010026ELAVL28860.388Esox_lucius
FBgn0086675fne9761.960ENSFCAG00000011976ELAVL29361.960Felis_catus
FBgn0086675fne9462.209ENSFALG00000007363ELAVL28462.209Ficedula_albicollis
FBgn0086675fne9761.473ENSFDAG00000018820ELAVL29061.473Fukomys_damarensis
FBgn0086675fne9960.845ENSFHEG00000010307ELAVL28860.845Fundulus_heteroclitus
FBgn0086675fne9960.665ENSGMOG00000011182ELAVL29660.665Gadus_morhua
FBgn0086675fne9461.919ENSGALG00000015799ELAVL28461.919Gallus_gallus
FBgn0086675fne9960.388ENSGAFG00000016517ELAVL28260.388Gambusia_affinis
FBgn0086675fne9960.563ENSGACG00000019484elavl29660.388Gasterosteus_aculeatus
FBgn0086675fne9761.299ENSGAGG00000022382ELAVL29461.299Gopherus_agassizii
FBgn0086675fne9761.207ENSGGOG00000003678ELAVL29361.207Gorilla_gorilla
FBgn0086675fne9960.388ENSHBUG00000005968ELAVL28860.388Haplochromis_burtoni
FBgn0086675fne9761.960ENSHGLG00000005423ELAVL29461.473Heterocephalus_glaber_female
FBgn0086675fne9761.960ENSHGLG00100002344ELAVL29461.473Heterocephalus_glaber_male
FBgn0086675fne9462.426ENSHCOG00000005961elavl28362.426Hippocampus_comes
FBgn0086675fne9261.631ENSIPUG00000012337elavl27961.631Ictalurus_punctatus
FBgn0086675fne9761.473ENSSTOG00000007792ELAVL29061.473Ictidomys_tridecemlineatus
FBgn0086675fne9761.473ENSJJAG00000008247Elavl29061.473Jaculus_jaculus
FBgn0086675fne9960.388ENSKMAG00000006299ELAVL28860.388Kryptolebias_marmoratus
FBgn0086675fne9961.127ENSLBEG00000027924ELAVL29261.127Labrus_bergylta
FBgn0086675fne9462.974ENSLACG00000010888ELAVL29161.355Latimeria_chalumnae
FBgn0086675fne9960.111ENSLOCG00000012575ELAVL29358.311Lepisosteus_oculatus
FBgn0086675fne9761.017ENSLAFG00000009938ELAVL29061.017Loxodonta_africana
FBgn0086675fne9761.473ENSMFAG00000039694ELAVL29461.017Macaca_fascicularis
FBgn0086675fne9761.473ENSMMUG00000010038ELAVL29460.278Macaca_mulatta
FBgn0086675fne9761.960ENSMNEG00000032526ELAVL29461.017Macaca_nemestrina
FBgn0086675fne9960.833ENSMAMG00000004806ELAVL29660.833Mastacembelus_armatus
FBgn0086675fne9960.388ENSMZEG00005000778ELAVL28860.388Maylandia_zebra
FBgn0086675fne7750.542ENSMGAG00000008665ELAVL29950.542Meleagris_gallopavo
FBgn0086675fne9761.473ENSMAUG00000011955Elavl29361.207Mesocricetus_auratus
FBgn0086675fne9761.473ENSMICG00000001558ELAVL29161.017Microcebus_murinus
FBgn0086675fne9761.473ENSMOCG00000016960Elavl29061.473Microtus_ochrogaster
FBgn0086675fne9960.111ENSMMOG00000012031ELAVL29660.111Mola_mola
FBgn0086675fne9761.299ENSMODG00000003936ELAVL28761.299Monodelphis_domestica
FBgn0086675fne9961.299ENSMALG00000003411elavl28561.299Monopterus_albus
FBgn0086675fne9761.473MGP_CAROLIEiJ_G0026159Elavl29461.017Mus_caroli
FBgn0086675fne9761.960ENSMUSG00000008489Elavl29461.473Mus_musculus
FBgn0086675fne9761.473MGP_PahariEiJ_G0028496Elavl29461.017Mus_pahari
FBgn0086675fne9761.473MGP_SPRETEiJ_G0027124Elavl29461.017Mus_spretus
FBgn0086675fne9761.473ENSMPUG00000015967ELAVL28761.473Mustela_putorius_furo
FBgn0086675fne9759.128ENSMLUG00000014210ELAVL29159.128Myotis_lucifugus
FBgn0086675fne9960.278ENSNGAG00000014535Elavl29260.278Nannospalax_galili
FBgn0086675fne9362.898ENSNBRG00000023764-10059.545Neolamprologus_brichardi
FBgn0086675fne9955.493ENSNBRG00000010284ELAVL29555.493Neolamprologus_brichardi
FBgn0086675fne9761.960ENSNLEG00000016382ELAVL29461.473Nomascus_leucogenys
FBgn0086675fne9753.541ENSMEUG00000006499ELAVL28753.541Notamacropus_eugenii
FBgn0086675fne9761.473ENSOPRG00000012874ELAVL28761.473Ochotona_princeps
FBgn0086675fne9761.960ENSODEG00000002531ELAVL29461.473Octodon_degus
FBgn0086675fne9959.239ENSONIG00000007552ELAVL29459.239Oreochromis_niloticus
FBgn0086675fne9756.338ENSOANG00000009634ELAVL28456.338Ornithorhynchus_anatinus
FBgn0086675fne9761.473ENSOCUG00000005891ELAVL28761.473Oryctolagus_cuniculus
FBgn0086675fne9960.504ENSORLG00000004217ELAVL29560.504Oryzias_latipes
FBgn0086675fne9960.563ENSORLG00020016040ELAVL28860.563Oryzias_latipes_hni
FBgn0086675fne9961.299ENSORLG00015013661ELAVL28861.299Oryzias_latipes_hsok
FBgn0086675fne9960.388ENSOMEG00000005178ELAVL28860.388Oryzias_melastigma
FBgn0086675fne9556.913ENSOGAG00000016228ELAVL29056.913Otolemur_garnettii
FBgn0086675fne9761.473ENSOARG00000014465ELAVL29061.017Ovis_aries
FBgn0086675fne9761.756ENSPPAG00000041539ELAVL29161.756Pan_paniscus
FBgn0086675fne9761.960ENSPPRG00000018510ELAVL29361.960Panthera_pardus
FBgn0086675fne9761.960ENSPTIG00000005627ELAVL29461.473Panthera_tigris_altaica
FBgn0086675fne9761.473ENSPTRG00000020830ELAVL29461.017Pan_troglodytes
FBgn0086675fne9761.473ENSPANG00000025263ELAVL29260.274Papio_anubis
FBgn0086675fne9960.665ENSPKIG00000006187ELAVL29060.665Paramormyrops_kingsleyae
FBgn0086675fne9960.278ENSPKIG00000001903-9560.278Paramormyrops_kingsleyae
FBgn0086675fne9261.963ENSPSIG00000015330ELAVL29961.963Pelodiscus_sinensis
FBgn0086675fne9960.111ENSPMGG00000022018elavl29660.111Periophthalmus_magnuspinnatus
FBgn0086675fne9761.473ENSPEMG00000014101Elavl29061.473Peromyscus_maniculatus_bairdii
FBgn0086675fne9761.960ENSPCIG00000011696ELAVL29161.960Phascolarctos_cinereus
FBgn0086675fne9960.388ENSPFOG00000003436ELAVL28260.388Poecilia_formosa
FBgn0086675fne9960.388ENSPLAG00000005203ELAVL29660.055Poecilia_latipinna
FBgn0086675fne9960.615ENSPMEG00000021929ELAVL28860.615Poecilia_mexicana
FBgn0086675fne9960.388ENSPREG00000017160ELAVL28860.388Poecilia_reticulata
FBgn0086675fne9761.473ENSPPYG00000019166ELAVL28761.473Pongo_abelii
FBgn0086675fne9758.357ENSPCAG00000014998ELAVL28758.357Procavia_capensis
FBgn0086675fne9761.960ENSPCOG00000022819ELAVL29361.960Propithecus_coquereli
FBgn0086675fne9761.473ENSPVAG00000002688ELAVL28761.473Pteropus_vampyrus
FBgn0086675fne9961.064ENSPNYG00000001514ELAVL29763.964Pundamilia_nyererei
FBgn0086675fne9461.628ENSPNAG00000029068ELAVL28362.170Pygocentrus_nattereri
FBgn0086675fne9761.473ENSRNOG00000006853Elavl29361.207Rattus_norvegicus
FBgn0086675fne9761.960ENSRBIG00000029495ELAVL29361.960Rhinopithecus_bieti
FBgn0086675fne9761.960ENSRROG00000041782ELAVL29461.017Rhinopithecus_roxellana
FBgn0086675fne9761.473ENSSBOG00000028114ELAVL29260.221Saimiri_boliviensis_boliviensis
FBgn0086675fne9462.130ENSSHAG00000006756ELAVL29859.871Sarcophilus_harrisii
FBgn0086675fne9959.834ENSSFOG00015001257ELAVL29359.834Scleropages_formosus
FBgn0086675fne9960.665ENSSFOG00015018252elavl28860.665Scleropages_formosus
FBgn0086675fne9960.388ENSSMAG00000010745ELAVL28860.388Scophthalmus_maximus
FBgn0086675fne9960.388ENSSDUG00000008140ELAVL28860.388Seriola_dumerili
FBgn0086675fne9960.388ENSSLDG00000008455ELAVL29660.388Seriola_lalandi_dorsalis
FBgn0086675fne9761.473ENSSARG00000005702ELAVL28761.473Sorex_araneus
FBgn0086675fne9761.299ENSSPUG00000001246ELAVL29461.299Sphenodon_punctatus
FBgn0086675fne9960.388ENSSPAG00000002388ELAVL29660.388Stegastes_partitus
FBgn0086675fne9761.473ENSSSCG00000005130ELAVL29461.473Sus_scrofa
FBgn0086675fne9459.943ENSTGUG00000001349ELAVL29059.943Taeniopygia_guttata
FBgn0086675fne9462.791ENSTNIG00000011312elavl28762.791Tetraodon_nigroviridis
FBgn0086675fne9750.992ENSTBEG00000017759ELAVL28750.992Tupaia_belangeri
FBgn0086675fne9761.473ENSTTRG00000011656ELAVL28761.473Tursiops_truncatus
FBgn0086675fne9761.207ENSUAMG00000018679ELAVL29261.017Ursus_americanus
FBgn0086675fne9959.834ENSUMAG00000005644ELAVL29759.834Ursus_maritimus
FBgn0086675fne9761.473ENSVPAG00000005109ELAVL28761.473Vicugna_pacos
FBgn0086675fne9761.960ENSVVUG00000021291ELAVL29361.960Vulpes_vulpes
FBgn0086675fne9562.644ENSXETG00000009387elavl29962.500Xenopus_tropicalis
FBgn0086675fne9960.615ENSXCOG00000002464ELAVL29460.615Xiphophorus_couchianus
FBgn0086675fne9960.388ENSXMAG00000029211ELAVL28260.388Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003729mRNA binding10908586.ISSFunction
GO:0005737cytoplasm12591606.IDAComponent
GO:0008049male courtship behavior22741816.IMPProcess
GO:0008266poly(U) RNA binding12591606.IDAFunction
GO:0050684regulation of mRNA processing26124284.IGIProcess
GO:0051252regulation of RNA metabolic process12591606.IMPProcess

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