EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0086683 (Gene tree)
Gene ID: 3355114
Gene Symbol: Spf45
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1513 bases
Position: chr2L:23066874-23068386
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0110506	RRM_1	PF00076.22	0.00016	1	1
FBpp0110573	RRM_1	PF00076.22	0.00016	1	1
FBpp0110561	RRM_1	PF00076.22	0.00018	1	1
FBpp0110506	G-patch	PF01585.23	9.1e-12	1	1
FBpp0110561	G-patch	PF01585.23	9.2e-12	1	1
FBpp0110573	G-patch	PF01585.23	9.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0111240	-	1354	-	FBpp0110573	371 (aa)	-	Q7PL81
FBtr0111241	-	1257	-	FBpp0110506	363 (aa)	-	Q7PL82
FBtr0111239	-	1397	-	FBpp0110561	403 (aa)	-	Q6NL39

Gene Model

Click here to download FBgn0086683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0086683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0086683	Spf45	99	36.476	ENSG00000134453	RBM17	99	36.203	Homo_sapiens
FBgn0086683	Spf45	99	36.264	ENSAPOG00000007101	rbm17	99	37.037	Acanthochromis_polyacanthus
FBgn0086683	Spf45	99	36.476	ENSAMEG00000002107	RBM17	99	36.203	Ailuropoda_melanoleuca
FBgn0086683	Spf45	99	36.245	ENSACIG00000006251	rbm17	99	37.086	Amphilophus_citrinellus
FBgn0086683	Spf45	99	37.029	ENSAOCG00000014892	rbm17	99	37.802	Amphiprion_ocellaris
FBgn0086683	Spf45	99	37.029	ENSAPEG00000022779	rbm17	99	37.802	Amphiprion_percula
FBgn0086683	Spf45	99	36.748	ENSATEG00000004406	rbm17	99	37.637	Anabas_testudineus
FBgn0086683	Spf45	99	35.036	ENSAPLG00000004190	RBM17	99	34.924	Anas_platyrhynchos
FBgn0086683	Spf45	99	34.383	ENSACAG00000005418	RBM17	97	35.351	Anolis_carolinensis
FBgn0086683	Spf45	99	36.476	ENSANAG00000030127	RBM17	82	63.107	Aotus_nancymaae
FBgn0086683	Spf45	99	35.952	ENSANAG00000019330	-	83	60.194	Aotus_nancymaae
FBgn0086683	Spf45	99	36.667	ENSACLG00000003928	rbm17	99	37.671	Astatotilapia_calliptera
FBgn0086683	Spf45	99	34.989	ENSAMXG00000005853	rbm17	99	37.416	Astyanax_mexicanus
FBgn0086683	Spf45	99	36.228	ENSBTAG00000021951	RBM17	99	35.982	Bos_taurus
FBgn0086683	Spf45	99	35.075	ENSBTAG00000011094	-	99	34.735	Bos_taurus
FBgn0086683	Spf45	99	36.476	ENSCJAG00000020573	RBM17	99	36.203	Callithrix_jacchus
FBgn0086683	Spf45	99	36.476	ENSCAFG00000005206	RBM17	99	36.203	Canis_familiaris
FBgn0086683	Spf45	99	36.096	ENSCAFG00020005420	RBM17	99	35.347	Canis_lupus_dingo
FBgn0086683	Spf45	99	36.228	ENSCHIG00000023204	-	99	35.982	Capra_hircus
FBgn0086683	Spf45	99	35.236	ENSCHIG00000019921	-	99	34.879	Capra_hircus
FBgn0086683	Spf45	99	36.790	ENSTSYG00000001165	RBM17	86	63.107	Carlito_syrichta
FBgn0086683	Spf45	99	33.333	ENSCAPG00000006275	RBM17	96	32.905	Cavia_aperea
FBgn0086683	Spf45	99	36.957	ENSCPOG00000005679	RBM17	99	36.384	Cavia_porcellus
FBgn0086683	Spf45	99	36.476	ENSCCAG00000018655	RBM17	82	63.107	Cebus_capucinus
FBgn0086683	Spf45	99	36.957	ENSCATG00000041566	RBM17	82	63.107	Cercocebus_atys
FBgn0086683	Spf45	99	36.725	ENSCLAG00000012195	RBM17	99	36.424	Chinchilla_lanigera
FBgn0086683	Spf45	99	36.476	ENSCSAG00000013564	RBM17	99	36.203	Chlorocebus_sabaeus
FBgn0086683	Spf45	79	31.077	ENSCHOG00000005131	RBM17	74	31.385	Choloepus_hoffmanni
FBgn0086683	Spf45	99	35.222	ENSCPBG00000019836	RBM17	99	35.088	Chrysemys_picta_bellii
FBgn0086683	Spf45	54	48.718	ENSCING00000004543	-	88	48.718	Ciona_intestinalis
FBgn0086683	Spf45	99	35.955	ENSCSAVG00000008782	-	99	36.404	Ciona_savignyi
FBgn0086683	Spf45	99	36.476	ENSCANG00000030987	RBM17	82	63.107	Colobus_angolensis_palliatus
FBgn0086683	Spf45	99	37.265	ENSCANG00000023715	-	98	37.500	Colobus_angolensis_palliatus
FBgn0086683	Spf45	99	36.476	ENSCGRG00001013842	Rbm17	99	36.203	Cricetulus_griseus_chok1gshd
FBgn0086683	Spf45	99	35.772	ENSCGRG00001009256	-	99	35.561	Cricetulus_griseus_chok1gshd
FBgn0086683	Spf45	99	36.476	ENSCGRG00000006907	Rbm17	99	36.203	Cricetulus_griseus_crigri
FBgn0086683	Spf45	99	35.841	ENSCSEG00000018164	rbm17	99	37.556	Cynoglossus_semilaevis
FBgn0086683	Spf45	62	49.138	ENSCVAG00000002476	rbm17	99	38.095	Cyprinodon_variegatus
FBgn0086683	Spf45	99	35.556	ENSDARG00000031346	rbm17	99	37.307	Danio_rerio
FBgn0086683	Spf45	99	36.725	ENSDNOG00000035920	RBM17	99	36.424	Dasypus_novemcinctus
FBgn0086683	Spf45	63	37.553	ENSEBUG00000010253	rbm17	65	37.553	Eptatretus_burgeri
FBgn0086683	Spf45	99	35.732	ENSEASG00005009236	-	97	35.096	Equus_asinus_asinus
FBgn0086683	Spf45	99	36.685	ENSEASG00005019205	-	99	36.054	Equus_asinus_asinus
FBgn0086683	Spf45	99	31.514	ENSECAG00000001379	-	99	31.347	Equus_caballus
FBgn0086683	Spf45	99	31.742	ENSECAG00000008939	RBM17	99	31.106	Equus_caballus
FBgn0086683	Spf45	59	31.615	ENSEEUG00000013077	RBM17	79	31.959	Erinaceus_europaeus
FBgn0086683	Spf45	99	35.808	ENSELUG00000006440	rbm17	99	36.304	Esox_lucius
FBgn0086683	Spf45	99	36.476	ENSFCAG00000031988	RBM17	99	36.203	Felis_catus
FBgn0086683	Spf45	99	35.468	ENSFALG00000001790	RBM17	99	35.307	Ficedula_albicollis
FBgn0086683	Spf45	99	36.725	ENSFDAG00000007470	RBM17	99	36.424	Fukomys_damarensis
FBgn0086683	Spf45	61	50.661	ENSFHEG00000001266	rbm17	99	38.194	Fundulus_heteroclitus
FBgn0086683	Spf45	99	34.735	ENSGMOG00000008438	rbm17	99	34.573	Gadus_morhua
FBgn0086683	Spf45	99	35.468	ENSGALG00000006332	RBM17	99	35.307	Gallus_gallus
FBgn0086683	Spf45	99	38.107	ENSGAFG00000019879	rbm17	99	38.356	Gambusia_affinis
FBgn0086683	Spf45	99	37.778	ENSGACG00000019174	rbm17	99	37.143	Gasterosteus_aculeatus
FBgn0086683	Spf45	99	35.222	ENSGAGG00000019906	RBM17	99	35.088	Gopherus_agassizii
FBgn0086683	Spf45	99	37.029	ENSHBUG00000016624	rbm17	99	37.671	Haplochromis_burtoni
FBgn0086683	Spf45	99	36.725	ENSHGLG00000011580	RBM17	99	36.424	Heterocephalus_glaber_female
FBgn0086683	Spf45	99	36.725	ENSHGLG00100010460	RBM17	99	36.424	Heterocephalus_glaber_male
FBgn0086683	Spf45	99	34.048	ENSHGLG00100010556	-	99	33.414	Heterocephalus_glaber_male
FBgn0086683	Spf45	99	36.739	ENSHCOG00000010865	rbm17	99	37.527	Hippocampus_comes
FBgn0086683	Spf45	62	44.664	ENSIPUG00000007699	Rbm17	99	36.947	Ictalurus_punctatus
FBgn0086683	Spf45	99	36.476	ENSSTOG00000013591	RBM17	99	36.203	Ictidomys_tridecemlineatus
FBgn0086683	Spf45	99	36.476	ENSJJAG00000022886	Rbm17	99	36.203	Jaculus_jaculus
FBgn0086683	Spf45	99	36.607	ENSKMAG00000021400	rbm17	99	37.251	Kryptolebias_marmoratus
FBgn0086683	Spf45	99	37.029	ENSLBEG00000000881	rbm17	99	37.029	Labrus_bergylta
FBgn0086683	Spf45	53	47.000	ENSLACG00000017297	RBM17	99	34.894	Latimeria_chalumnae
FBgn0086683	Spf45	99	35.320	ENSLOCG00000015659	rbm17	99	35.730	Lepisosteus_oculatus
FBgn0086683	Spf45	99	37.284	ENSLAFG00000011629	RBM17	99	36.923	Loxodonta_africana
FBgn0086683	Spf45	99	36.957	ENSMFAG00000035521	RBM17	82	63.107	Macaca_fascicularis
FBgn0086683	Spf45	99	36.476	ENSMMUG00000015152	RBM17	82	63.107	Macaca_mulatta
FBgn0086683	Spf45	99	36.957	ENSMNEG00000017264	RBM17	82	63.107	Macaca_nemestrina
FBgn0086683	Spf45	99	36.957	ENSMLEG00000029340	RBM17	82	63.107	Mandrillus_leucophaeus
FBgn0086683	Spf45	99	37.845	ENSMAMG00000000387	rbm17	99	38.190	Mastacembelus_armatus
FBgn0086683	Spf45	99	37.029	ENSMZEG00005015179	rbm17	99	37.671	Maylandia_zebra
FBgn0086683	Spf45	99	35.523	ENSMGAG00000003981	RBM17	99	35.358	Meleagris_gallopavo
FBgn0086683	Spf45	99	36.476	ENSMAUG00000019247	Rbm17	99	36.203	Mesocricetus_auratus
FBgn0086683	Spf45	99	36.623	ENSMICG00000003976	-	99	36.044	Microcebus_murinus
FBgn0086683	Spf45	99	34.169	ENSMICG00000041489	-	99	34.169	Microcebus_murinus
FBgn0086683	Spf45	92	31.061	ENSMOCG00000014517	-	97	31.061	Microtus_ochrogaster
FBgn0086683	Spf45	99	36.476	ENSMOCG00000011847	Rbm17	99	36.203	Microtus_ochrogaster
FBgn0086683	Spf45	99	34.437	ENSMMOG00000010264	rbm17	99	35.056	Mola_mola
FBgn0086683	Spf45	99	36.318	ENSMODG00000016648	RBM17	99	36.062	Monodelphis_domestica
FBgn0086683	Spf45	99	37.915	ENSMALG00000010597	rbm17	99	38.353	Monopterus_albus
FBgn0086683	Spf45	99	36.476	MGP_CAROLIEiJ_G0023173	Rbm17	99	36.203	Mus_caroli
FBgn0086683	Spf45	99	36.476	ENSMUSG00000037197	Rbm17	99	36.203	Mus_musculus
FBgn0086683	Spf45	99	35.468	MGP_PahariEiJ_G0019233	Rbm17	99	35.307	Mus_pahari
FBgn0086683	Spf45	99	36.476	MGP_SPRETEiJ_G0024091	Rbm17	99	36.203	Mus_spretus
FBgn0086683	Spf45	87	32.338	ENSMPUG00000016359	RBM17	97	32.587	Mustela_putorius_furo
FBgn0086683	Spf45	99	36.054	ENSMLUG00000025709	-	99	36.054	Myotis_lucifugus
FBgn0086683	Spf45	99	36.228	ENSMLUG00000002302	-	99	35.982	Myotis_lucifugus
FBgn0086683	Spf45	99	36.476	ENSNGAG00000000741	Rbm17	99	36.203	Nannospalax_galili
FBgn0086683	Spf45	99	31.415	ENSNGAG00000000663	-	99	31.415	Nannospalax_galili
FBgn0086683	Spf45	99	37.963	ENSNBRG00000018148	rbm17	99	39.286	Neolamprologus_brichardi
FBgn0086683	Spf45	99	36.476	ENSNLEG00000033350	RBM17	82	63.107	Nomascus_leucogenys
FBgn0086683	Spf45	99	33.002	ENSMEUG00000011347	RBM17	99	33.113	Notamacropus_eugenii
FBgn0086683	Spf45	53	41.753	ENSOPRG00000002993	RBM17	99	30.444	Ochotona_princeps
FBgn0086683	Spf45	99	36.476	ENSODEG00000004393	RBM17	99	36.203	Octodon_degus
FBgn0086683	Spf45	86	30.882	ENSODEG00000007286	-	78	30.882	Octodon_degus
FBgn0086683	Spf45	99	37.376	ENSONIG00000011838	rbm17	99	36.703	Oreochromis_niloticus
FBgn0086683	Spf45	99	35.891	ENSOANG00000015455	RBM17	99	35.371	Ornithorhynchus_anatinus
FBgn0086683	Spf45	99	37.778	ENSORLG00000028798	rbm17	99	37.445	Oryzias_latipes
FBgn0086683	Spf45	99	37.360	ENSORLG00020004593	rbm17	99	37.589	Oryzias_latipes_hni
FBgn0086683	Spf45	99	37.778	ENSORLG00015000033	rbm17	99	36.564	Oryzias_latipes_hsok
FBgn0086683	Spf45	99	37.584	ENSOMEG00000012060	rbm17	97	52.128	Oryzias_melastigma
FBgn0086683	Spf45	99	36.790	ENSOGAG00000015687	RBM17	99	36.484	Otolemur_garnettii
FBgn0086683	Spf45	99	36.228	ENSOARG00000012975	RBM17	99	35.982	Ovis_aries
FBgn0086683	Spf45	99	36.476	ENSPPAG00000032347	RBM17	82	63.107	Pan_paniscus
FBgn0086683	Spf45	99	36.476	ENSPPRG00000010706	RBM17	99	36.203	Panthera_pardus
FBgn0086683	Spf45	99	36.476	ENSPTIG00000007596	RBM17	99	36.203	Panthera_tigris_altaica
FBgn0086683	Spf45	99	36.476	ENSPTRG00000002265	RBM17	82	63.107	Pan_troglodytes
FBgn0086683	Spf45	99	36.957	ENSPANG00000023425	RBM17	82	63.107	Papio_anubis
FBgn0086683	Spf45	99	35.938	ENSPKIG00000005048	-	99	36.322	Paramormyrops_kingsleyae
FBgn0086683	Spf45	99	35.853	ENSPKIG00000025526	rbm17	99	35.931	Paramormyrops_kingsleyae
FBgn0086683	Spf45	99	34.230	ENSPSIG00000012332	RBM17	99	34.205	Pelodiscus_sinensis
FBgn0086683	Spf45	99	36.830	ENSPMGG00000007980	rbm17	99	37.500	Periophthalmus_magnuspinnatus
FBgn0086683	Spf45	99	36.476	ENSPEMG00000014320	Rbm17	99	36.203	Peromyscus_maniculatus_bairdii
FBgn0086683	Spf45	99	36.476	ENSPCIG00000019260	-	99	36.044	Phascolarctos_cinereus
FBgn0086683	Spf45	61	51.304	ENSPFOG00000013271	rbm17	99	38.022	Poecilia_formosa
FBgn0086683	Spf45	99	38.353	ENSPLAG00000004455	rbm17	99	38.568	Poecilia_latipinna
FBgn0086683	Spf45	99	37.363	ENSPMEG00000014864	rbm17	99	38.022	Poecilia_mexicana
FBgn0086683	Spf45	61	50.000	ENSPREG00000015589	rbm17	99	37.615	Poecilia_reticulata
FBgn0086683	Spf45	99	36.476	ENSPPYG00000002067	RBM17	99	36.203	Pongo_abelii
FBgn0086683	Spf45	97	31.121	ENSPPYG00000019881	-	97	30.876	Pongo_abelii
FBgn0086683	Spf45	99	31.718	ENSPCAG00000016879	RBM17	99	31.938	Procavia_capensis
FBgn0086683	Spf45	99	36.512	ENSPCOG00000027881	RBM17	99	36.891	Propithecus_coquereli
FBgn0086683	Spf45	99	31.429	ENSPVAG00000015499	RBM17	99	32.816	Pteropus_vampyrus
FBgn0086683	Spf45	99	37.002	ENSPNYG00000015274	rbm17	99	37.767	Pundamilia_nyererei
FBgn0086683	Spf45	65	44.715	ENSPNAG00000030046	rbm17	99	36.264	Pygocentrus_nattereri
FBgn0086683	Spf45	99	36.476	ENSRNOG00000018767	Rbm17	99	36.203	Rattus_norvegicus
FBgn0086683	Spf45	99	36.476	ENSRBIG00000043727	RBM17	82	63.107	Rhinopithecus_bieti
FBgn0086683	Spf45	99	36.957	ENSRROG00000044142	RBM17	82	63.107	Rhinopithecus_roxellana
FBgn0086683	Spf45	99	36.228	ENSSBOG00000031661	-	82	62.136	Saimiri_boliviensis_boliviensis
FBgn0086683	Spf45	99	35.123	ENSSBOG00000023653	-	99	35.347	Saimiri_boliviensis_boliviensis
FBgn0086683	Spf45	99	36.318	ENSSHAG00000012480	-	99	36.062	Sarcophilus_harrisii
FBgn0086683	Spf45	99	36.946	ENSSFOG00015009892	rbm17	99	37.310	Scleropages_formosus
FBgn0086683	Spf45	99	36.930	ENSSMAG00000012368	rbm17	99	37.393	Scophthalmus_maximus
FBgn0086683	Spf45	99	36.446	ENSSDUG00000015015	rbm17	99	38.051	Seriola_dumerili
FBgn0086683	Spf45	99	36.446	ENSSLDG00000014486	rbm17	99	38.051	Seriola_lalandi_dorsalis
FBgn0086683	Spf45	63	30.970	ENSSARG00000001792	-	94	31.343	Sorex_araneus
FBgn0086683	Spf45	99	35.667	ENSSPUG00000001036	RBM17	99	35.886	Sphenodon_punctatus
FBgn0086683	Spf45	99	37.054	ENSSPAG00000002338	rbm17	99	38.235	Stegastes_partitus
FBgn0086683	Spf45	99	36.228	ENSSSCG00000011134	RBM17	99	35.982	Sus_scrofa
FBgn0086683	Spf45	99	35.714	ENSTGUG00000002013	RBM17	99	35.526	Taeniopygia_guttata
FBgn0086683	Spf45	99	35.619	ENSTRUG00000010698	rbm17	99	36.580	Takifugu_rubripes
FBgn0086683	Spf45	99	35.870	ENSTNIG00000006892	rbm17	99	36.853	Tetraodon_nigroviridis
FBgn0086683	Spf45	99	36.228	ENSTTRG00000001344	RBM17	97	36.386	Tursiops_truncatus
FBgn0086683	Spf45	99	35.185	ENSUAMG00000009499	RBM17	99	35.763	Ursus_americanus
FBgn0086683	Spf45	99	36.476	ENSUMAG00000012237	RBM17	99	36.203	Ursus_maritimus
FBgn0086683	Spf45	59	73.810	ENSVPAG00000005497	RBM17	91	61.364	Vicugna_pacos
FBgn0086683	Spf45	99	36.096	ENSVVUG00000006780	RBM17	99	35.347	Vulpes_vulpes
FBgn0086683	Spf45	99	36.946	ENSXETG00000018123	rbm17	99	36.404	Xenopus_tropicalis
FBgn0086683	Spf45	99	36.526	ENSXMAG00000008674	rbm17	99	38.128	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000380	alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	17154718.	IGI	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0001745	compound eye morphogenesis	21873635.	IBA	Process
GO:0001745	compound eye morphogenesis	18337722.	IGI	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006281	DNA repair	17154718.	IMP	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component