EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0086694 (Gene tree)
Gene ID: 38652
Gene Symbol: Bre1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 4362
Position: chr3L: 5789831-5794192
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0077116	-	3632	-	FBpp0076822	1044 (aa)	-	Q9VRP9
FBtr0344538	-	3993	-	FBpp0310889	1044 (aa)	-	Q9VRP9

Gene Model

Click here to download FBgn0086694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0086694's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0086694	Bre1	98	43.361	ENSG00000103549	RNF40	98	49.028	Homo_sapiens
FBgn0086694	Bre1	50	40.072	ENSG00000155827	RNF20	99	42.007	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	-	ISS	Component
GO:0004842	ubiquitin-protein transferase activity	-	ISS	Function
GO:0005634	nucleus	15691768.	IDA	Component
GO:0006513	protein monoubiquitination	15691768.	IMP	Process
GO:0008270	zinc ion binding	21912646.	ISM	Function
GO:0010390	histone monoubiquitination	-	IEA	Process
GO:0016570	histone modification	15691768.	IMP	Process
GO:0016574	histone ubiquitination	15691768.	IMP	Process
GO:0016574	histone ubiquitination	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function