EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0086706 (Gene tree)
Gene ID: 39027
Gene Symbol: pix
Alias: -
Full Name: pixie
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2710
Position: chr3L: 8972056-8974765
Accession: FBgn0086706
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076557	-	2223	-	FBpp0076284	611 (aa)	-	Q9VSS1
FBtr0076558	-	2184	-	FBpp0076285	611 (aa)	-	Q9VSS1

Gene Model

Click here to download FBgn0086706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0086706's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0086706	pix	98	77.258	ENSG00000164163	ABCE1	99	78.947	Homo_sapiens
FBgn0086706	pix	98	77.258	ENSMUSG00000058355	Abce1	99	77.258	Mus_musculus
FBgn0086706	pix	98	67.496	YDR091C		99	67.496	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000054	ribosomal subunit export from nucleus	21873635.	IBA	Process
GO:0001558	regulation of cell growth	16291791.	IMP	Process
GO:0005506	iron ion binding	21873635.	IBA	Function
GO:0005515	protein binding	17392269.	IPI	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005524	ATP binding	17392269.	IMP	Function
GO:0005737	cytoplasm	16291791.	IDA	Component
GO:0005829	cytosol	17392269.	IDA	Component
GO:0006412	translation	16291791.	IMP	Process
GO:0006413	translational initiation	21873635.	IBA	Process
GO:0006413	translational initiation	17392269.	IMP	Process
GO:0006415	translational termination	21873635.	IBA	Process
GO:0016887	ATPase activity	-	IEA	Function
GO:0031369	translation initiation factor binding	17392269.	IPI	Function
GO:0032790	ribosome disassembly	-	ISS	Process
GO:0043024	ribosomal small subunit binding	21873635.	IBA	Function
GO:0043024	ribosomal small subunit binding	17392269.	IDA	Function
GO:0043524	negative regulation of neuron apoptotic process	16291791.	IMP	Process
GO:0070481	nuclear-transcribed mRNA catabolic process, non-stop decay	25128630.	IGI	Process