EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0086707 (Gene tree)
Gene ID: 35099
Gene Symbol: ncm
Alias: -
Full Name: nucampholin
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 4451 bases
Position: chr2L:18444507-18448957
Accession: FBgn0086707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080638	MA3	PF02847.17	4.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0081088	-	4231	-	FBpp0080638	1330 (aa)	-	Q9VJ87

Gene Model

Click here to download FBgn0086707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0086707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0086707	ncm	53	58.986	ENSACIG00000020055	cwc22	71	57.781	Amphilophus_citrinellus
FBgn0086707	ncm	57	58.039	ENSHBUG00000010504	cwc22	62	65.129	Haplochromis_burtoni
FBgn0086707	ncm	52	56.947	ENSHGLG00100016497	CWC22	90	59.966	Heterocephalus_glaber_male
FBgn0086707	ncm	72	55.960	ENSLACG00000005916	CWC22	50	58.348	Latimeria_chalumnae
FBgn0086707	ncm	50	56.999	ENSLOCG00000006456	cwc22	58	63.834	Lepisosteus_oculatus
FBgn0086707	ncm	50	57.481	MGP_CAROLIEiJ_G0023696	-	74	64.727	Mus_caroli
FBgn0086707	ncm	50	56.769	ENSOANG00000008649	CWC22	67	64.912	Ornithorhynchus_anatinus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0005515	protein binding	22961380.	IPI	Function
GO:0005681	spliceosomal complex	-	ISS	Component
GO:0071006	U2-type catalytic step 1 spliceosome	21873635.	IBA	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component