EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0087013 (Gene tree)
Gene ID: 40581
Gene Symbol: Karybeta3
Alias: -
Full Name: Karyopherin beta 3
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 5449
Position: chr3R: 4649176-4654624
Accession: FBgn0087013
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078860	-	4364	-	FBpp0078500	1105 (aa)	-	Q9VN44
FBtr0336462	-	4186	-	FBpp0307568	1105 (aa)	-	Q86NQ0

Gene Model

Click here to download FBgn0087013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0087013's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0087013	Karybeta3	93	32.102	YMR308C	PSE1	93	32.034	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	14668392.	IDA	Component
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006610	ribosomal protein import into nucleus	21873635.	IBA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0031965	nuclear membrane	21873635.	IBA	Component
GO:0034399	nuclear periphery	21873635.	IBA	Component