EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0087039 (Gene tree)
Gene ID: 38934
Gene Symbol: Sbp2
Alias: -
Full Name: SECIS-binding protein 2
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1169 bases
Position: chr3L:8304157-8305325
Accession: FBgn0087039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076430	Ribosomal_L7Ae	PF01248.26	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076707	-	1055	-	FBpp0076430	313 (aa)	-	Q9VSH1

Gene Model

Click here to download FBgn0087039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0087039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0087039	Sbp2	58	32.240	ENSACIG00000024185	secisbp2	62	31.373	Amphilophus_citrinellus
FBgn0087039	Sbp2	75	31.727	ENSCSEG00000010220	-	71	31.727	Cynoglossus_semilaevis
FBgn0087039	Sbp2	73	31.381	ENSEBUG00000008208	secisbp2	65	31.381	Eptatretus_burgeri
FBgn0087039	Sbp2	74	32.489	ENSELUG00000014795	-	55	32.489	Esox_lucius
FBgn0087039	Sbp2	86	30.282	ENSMMOG00000017977	secisbp2	67	30.282	Mola_mola
FBgn0087039	Sbp2	75	31.716	ENSPLAG00000004505	secisbp2	62	31.716	Poecilia_latipinna

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001514	selenocysteine incorporation	21873635.	IBA	Process
GO:0001514	selenocysteine incorporation	19223320.	IDA	Process
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0035368	selenocysteine insertion sequence binding	21873635.	IBA	Function
GO:0035368	selenocysteine insertion sequence binding	19223320.	IDA	Function
GO:0035613	RNA stem-loop binding	19223320.	IDA	Function
GO:0043021	ribonucleoprotein complex binding	21873635.	IBA	Function
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component
GO:1990904	ribonucleoprotein complex	19223320.	IDA	Component