EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0250786 (Gene tree)
Gene ID: 33505
Gene Symbol: Chd1
Alias: -
Full Name: Chromodomain-helicase-DNA-binding protein 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 8162 bases
Position: chr2L:2979562-2987723
Accession: FBgn0250786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0304044	ResIII	PF04851.15	4.4e-09	1	1
FBpp0077358	ResIII	PF04851.15	4.4e-09	1	1
FBpp0297122	ResIII	PF04851.15	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0077674	-	6332	-	FBpp0077358	1883 (aa)	-	Q7KU24
FBtr0305980	-	6216	-	FBpp0297122	1900 (aa)	-	B1PFT0
FBtr0331654	-	6463	-	FBpp0304044	1881 (aa)	-	B1PFZ0

Gene Model

Click here to download FBgn0250786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0250786's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0250786	Chd1	69	46.218	WBGene00010369	chd-1	73	51.291	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	8692958.	IDA	Function
GO:0004386	helicase activity	8692958.10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005703	polytene chromosome puff	8692958.	IDA	Component
GO:0005705	polytene chromosome interband	8692958.	IDA	Component
GO:0007476	imaginal disc-derived wing morphogenesis	18202396.	IMP	Process
GO:0035042	fertilization, exchange of chromosomal proteins	17717186.	IMP	Process
GO:0043044	ATP-dependent chromatin remodeling	23533627.	IMP	Process
GO:0043486	histone exchange	17717186.	IMP	Process
GO:0048477	oogenesis	18202396.	IMP	Process