EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0259139 (Gene tree)
Gene ID: 41431
Gene Symbol: glo
Alias: -
Full Name: glorund
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 4134 bases
Position: chr3R:11815206-11819339
Accession: FBgn0259139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0088856	RRM_1	PF00076.22	1.7e-22	1	2
FBpp0088856	RRM_1	PF00076.22	1.7e-22	2	2
FBpp0088858	RRM_1	PF00076.22	1.7e-22	1	2
FBpp0088858	RRM_1	PF00076.22	1.7e-22	2	2
FBpp0088857	RRM_1	PF00076.22	1.6e-11	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0089917	-	2129	-	FBpp0088856	586 (aa)	-	Q8IG99
FBtr0089918	-	2059	-	FBpp0088857	179 (aa)	-	Q8INJ6
FBtr0089919	-	2117	-	FBpp0088858	586 (aa)	-	Q9VGH5

Gene Model

Click here to download FBgn0259139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0259139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0259139	glo	85	37.008	WBGene00022253	hrpf-2	53	34.109	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005515	protein binding	19013444.	IPI	Function
GO:0006417	regulation of translation	16516833.	IMP	Process
GO:0007311	maternal specification of dorsal/ventral axis, oocyte, germ-line encoded	19013444.	IMP	Process
GO:0032991	protein-containing complex	19013444.	IPI	Component
GO:0042060	wound healing	19884309.	IMP	Process
GO:0045451	pole plasm oskar mRNA localization	19013444.	IMP	Process
GO:0051276	chromosome organization	19013444.	IMP	Process
GO:0060810	intracellular mRNA localization involved in pattern specification process	19013444.	IMP	Process