EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0260407 (Gene tree)
Gene ID: 318977
Gene Symbol: mRpS23
Alias: -
Full Name: mitochondrial ribosomal protein S23
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 823 bases
Position: chr2L:13834250-13835072
Accession: FBgn0260407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080143	MRP-S23	PF10484.9	9.3e-47	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0080566	-	707	-	FBpp0080143	189 (aa)	-	Q6NP77

Gene Model

Click here to download FBgn0260407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0260407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0260407	mRpS23	65	41.538	ENSG00000181610	MRPS23	84	41.538	Homo_sapiens
FBgn0260407	mRpS23	65	38.168	ENSAPOG00000011193	mrps23	75	38.168	Acanthochromis_polyacanthus
FBgn0260407	mRpS23	65	38.760	ENSAMEG00000002679	MRPS23	70	38.760	Ailuropoda_melanoleuca
FBgn0260407	mRpS23	65	41.221	ENSACIG00000016992	mrps23	69	41.221	Amphilophus_citrinellus
FBgn0260407	mRpS23	65	40.458	ENSAOCG00000000884	mrps23	74	40.458	Amphiprion_ocellaris
FBgn0260407	mRpS23	65	40.458	ENSAPEG00000007913	mrps23	74	40.458	Amphiprion_percula
FBgn0260407	mRpS23	61	41.803	ENSATEG00000003349	mrps23	67	41.803	Anabas_testudineus
FBgn0260407	mRpS23	71	43.836	ENSACAG00000005454	MRPS23	78	43.836	Anolis_carolinensis
FBgn0260407	mRpS23	65	40.769	ENSANAG00000028153	MRPS23	84	40.769	Aotus_nancymaae
FBgn0260407	mRpS23	65	40.152	ENSACLG00000022720	mrps23	73	40.152	Astatotilapia_calliptera
FBgn0260407	mRpS23	65	40.876	ENSAMXG00000011868	mrps23	72	40.876	Astyanax_mexicanus
FBgn0260407	mRpS23	65	41.538	ENSBTAG00000012366	MRPS23	67	41.538	Bos_taurus
FBgn0260407	mRpS23	55	40.566	WBGene00014224	mrps-23	79	40.566	Caenorhabditis_elegans
FBgn0260407	mRpS23	65	40.769	ENSCJAG00000014008	MRPS23	68	40.769	Callithrix_jacchus
FBgn0260407	mRpS23	65	41.538	ENSCAFG00000017421	MRPS23	67	41.538	Canis_familiaris
FBgn0260407	mRpS23	65	41.538	ENSCAFG00020025625	MRPS23	67	41.538	Canis_lupus_dingo
FBgn0260407	mRpS23	65	40.000	ENSCHIG00000019692	MRPS23	67	40.000	Capra_hircus
FBgn0260407	mRpS23	65	41.538	ENSTSYG00000009862	-	68	41.538	Carlito_syrichta
FBgn0260407	mRpS23	65	34.400	ENSTSYG00000034814	-	78	34.400	Carlito_syrichta
FBgn0260407	mRpS23	65	42.308	ENSCPOG00000008761	MRPS23	91	42.308	Cavia_porcellus
FBgn0260407	mRpS23	65	40.769	ENSCCAG00000016027	MRPS23	68	40.769	Cebus_capucinus
FBgn0260407	mRpS23	65	39.231	ENSCATG00000017194	MRPS23	67	39.231	Cercocebus_atys
FBgn0260407	mRpS23	65	43.846	ENSCLAG00000013109	MRPS23	91	43.846	Chinchilla_lanigera
FBgn0260407	mRpS23	58	37.069	ENSCSAG00000005635	MRPS23	55	37.069	Chlorocebus_sabaeus
FBgn0260407	mRpS23	65	38.346	ENSCPBG00000009923	MRPS23	68	38.346	Chrysemys_picta_bellii
FBgn0260407	mRpS23	60	32.593	ENSCING00000000318	-	88	32.593	Ciona_intestinalis
FBgn0260407	mRpS23	65	40.000	ENSCANG00000036817	MRPS23	67	40.000	Colobus_angolensis_palliatus
FBgn0260407	mRpS23	65	41.538	ENSCGRG00001000359	Mrps23	88	45.055	Cricetulus_griseus_chok1gshd
FBgn0260407	mRpS23	65	41.538	ENSCGRG00000004510	Mrps23	88	45.055	Cricetulus_griseus_crigri
FBgn0260407	mRpS23	64	45.736	ENSCSEG00000003275	mrps23	66	45.736	Cynoglossus_semilaevis
FBgn0260407	mRpS23	81	41.250	ENSDARG00000033973	mrps23	85	41.250	Danio_rerio
FBgn0260407	mRpS23	72	40.278	ENSDNOG00000034792	MRPS23	75	40.278	Dasypus_novemcinctus
FBgn0260407	mRpS23	65	40.769	ENSDORG00000026921	Mrps23	84	40.769	Dipodomys_ordii
FBgn0260407	mRpS23	65	41.538	ENSEASG00005002943	MRPS23	63	41.538	Equus_asinus_asinus
FBgn0260407	mRpS23	65	40.769	ENSECAG00000012333	MRPS23	67	40.769	Equus_caballus
FBgn0260407	mRpS23	65	41.538	ENSEEUG00000002560	MRPS23	67	41.538	Erinaceus_europaeus
FBgn0260407	mRpS23	65	44.444	ENSELUG00000016203	mrps23	71	44.444	Esox_lucius
FBgn0260407	mRpS23	65	39.231	ENSFCAG00000005711	-	67	39.231	Felis_catus
FBgn0260407	mRpS23	65	39.231	ENSFDAG00000007153	MRPS23	70	39.231	Fukomys_damarensis
FBgn0260407	mRpS23	65	38.760	ENSGALG00000005559	MRPS23	67	38.760	Gallus_gallus
FBgn0260407	mRpS23	69	41.549	ENSGACG00000000421	mrps23	74	41.549	Gasterosteus_aculeatus
FBgn0260407	mRpS23	65	37.594	ENSGAGG00000011812	MRPS23	68	37.594	Gopherus_agassizii
FBgn0260407	mRpS23	65	41.538	ENSGGOG00000016181	MRPS23	67	41.538	Gorilla_gorilla
FBgn0260407	mRpS23	65	38.168	ENSHBUG00000003221	mrps23	73	38.168	Haplochromis_burtoni
FBgn0260407	mRpS23	65	40.000	ENSHGLG00000012208	MRPS23	90	37.838	Heterocephalus_glaber_female
FBgn0260407	mRpS23	65	40.000	ENSHGLG00100003074	MRPS23	90	37.838	Heterocephalus_glaber_male
FBgn0260407	mRpS23	65	45.113	ENSHCOG00000012335	mrps23	71	45.113	Hippocampus_comes
FBgn0260407	mRpS23	65	43.182	ENSIPUG00000015227	Mrps23	69	43.182	Ictalurus_punctatus
FBgn0260407	mRpS23	55	40.541	ENSSTOG00000006711	MRPS23	90	40.541	Ictidomys_tridecemlineatus
FBgn0260407	mRpS23	55	36.937	ENSJJAG00000002424	Mrps23	89	41.758	Jaculus_jaculus
FBgn0260407	mRpS23	65	39.098	ENSKMAG00000004939	MRPS23	80	39.098	Kryptolebias_marmoratus
FBgn0260407	mRpS23	65	38.462	ENSLBEG00000025104	mrps23	63	38.462	Labrus_bergylta
FBgn0260407	mRpS23	65	45.038	ENSLACG00000015044	MRPS23	69	45.038	Latimeria_chalumnae
FBgn0260407	mRpS23	65	46.617	ENSLOCG00000004663	mrps23	63	46.617	Lepisosteus_oculatus
FBgn0260407	mRpS23	65	36.923	ENSLAFG00000001624	MRPS23	70	36.923	Loxodonta_africana
FBgn0260407	mRpS23	65	39.231	ENSMFAG00000031639	MRPS23	67	39.231	Macaca_fascicularis
FBgn0260407	mRpS23	65	30.769	ENSMFAG00000011500	-	85	30.769	Macaca_fascicularis
FBgn0260407	mRpS23	65	39.231	ENSMMUG00000001913	MRPS23	67	39.231	Macaca_mulatta
FBgn0260407	mRpS23	56	33.036	ENSMMUG00000039074	-	71	33.036	Macaca_mulatta
FBgn0260407	mRpS23	56	33.036	ENSMNEG00000018617	-	71	33.036	Macaca_nemestrina
FBgn0260407	mRpS23	65	40.000	ENSMNEG00000031351	MRPS23	67	40.000	Macaca_nemestrina
FBgn0260407	mRpS23	65	39.231	ENSMLEG00000030475	MRPS23	67	39.231	Mandrillus_leucophaeus
FBgn0260407	mRpS23	71	40.141	ENSMAMG00000002588	mrps23	76	40.141	Mastacembelus_armatus
FBgn0260407	mRpS23	65	38.931	ENSMZEG00005001041	mrps23	73	38.931	Maylandia_zebra
FBgn0260407	mRpS23	79	36.943	ENSMGAG00000008268	MRPS23	80	36.943	Meleagris_gallopavo
FBgn0260407	mRpS23	65	40.769	ENSMAUG00000014423	Mrps23	74	49.351	Mesocricetus_auratus
FBgn0260407	mRpS23	65	40.000	ENSMICG00000033206	MRPS23	85	40.000	Microcebus_murinus
FBgn0260407	mRpS23	65	41.538	ENSMOCG00000019113	Mrps23	73	50.000	Microtus_ochrogaster
FBgn0260407	mRpS23	61	37.302	ENSMMOG00000005033	mrps23	70	37.302	Mola_mola
FBgn0260407	mRpS23	65	43.511	ENSMODG00000028410	MRPS23	87	43.511	Monodelphis_domestica
FBgn0260407	mRpS23	65	45.038	ENSMALG00000001074	mrps23	72	45.038	Monopterus_albus
FBgn0260407	mRpS23	89	33.871	MGP_CAROLIEiJ_G0016946	Mrps23	100	33.871	Mus_caroli
FBgn0260407	mRpS23	89	33.871	ENSMUSG00000023723	Mrps23	100	33.871	Mus_musculus
FBgn0260407	mRpS23	65	41.538	MGP_PahariEiJ_G0018077	Mrps23	89	43.956	Mus_pahari
FBgn0260407	mRpS23	89	33.871	MGP_SPRETEiJ_G0017793	Mrps23	100	33.871	Mus_spretus
FBgn0260407	mRpS23	65	39.535	ENSMPUG00000015372	MRPS23	67	39.535	Mustela_putorius_furo
FBgn0260407	mRpS23	65	40.769	ENSMLUG00000008105	MRPS23	74	40.769	Myotis_lucifugus
FBgn0260407	mRpS23	55	36.036	ENSNGAG00000014608	Mrps23	90	36.036	Nannospalax_galili
FBgn0260407	mRpS23	65	39.394	ENSNBRG00000006143	mrps23	73	39.394	Neolamprologus_brichardi
FBgn0260407	mRpS23	65	40.769	ENSNLEG00000008072	-	67	40.769	Nomascus_leucogenys
FBgn0260407	mRpS23	58	37.931	ENSNLEG00000008070	-	77	37.931	Nomascus_leucogenys
FBgn0260407	mRpS23	65	42.308	ENSMEUG00000000577	MRPS23	72	42.308	Notamacropus_eugenii
FBgn0260407	mRpS23	65	42.308	ENSOPRG00000000887	MRPS23	67	42.308	Ochotona_princeps
FBgn0260407	mRpS23	55	38.739	ENSODEG00000011027	MRPS23	90	38.739	Octodon_degus
FBgn0260407	mRpS23	65	38.931	ENSONIG00000006417	mrps23	76	38.931	Oreochromis_niloticus
FBgn0260407	mRpS23	50	40.196	ENSOANG00000009720	MRPS23	62	40.196	Ornithorhynchus_anatinus
FBgn0260407	mRpS23	65	41.538	ENSOCUG00000003350	MRPS23	70	41.538	Oryctolagus_cuniculus
FBgn0260407	mRpS23	70	39.007	ENSORLG00000023980	mrps23	67	36.517	Oryzias_latipes
FBgn0260407	mRpS23	89	36.517	ENSORLG00020007935	mrps23	67	36.517	Oryzias_latipes_hni
FBgn0260407	mRpS23	65	41.221	ENSORLG00015013697	mrps23	55	41.221	Oryzias_latipes_hsok
FBgn0260407	mRpS23	65	41.985	ENSOMEG00000001278	mrps23	84	37.430	Oryzias_melastigma
FBgn0260407	mRpS23	65	38.462	ENSOGAG00000014476	MRPS23	67	38.462	Otolemur_garnettii
FBgn0260407	mRpS23	65	40.000	ENSOARG00000008003	MRPS23	67	40.000	Ovis_aries
FBgn0260407	mRpS23	65	41.538	ENSPPAG00000005764	MRPS23	67	41.538	Pan_paniscus
FBgn0260407	mRpS23	65	40.000	ENSPPRG00000002177	-	85	40.000	Panthera_pardus
FBgn0260407	mRpS23	65	39.535	ENSPTIG00000022034	MRPS23	85	39.535	Panthera_tigris_altaica
FBgn0260407	mRpS23	65	41.538	ENSPTRG00000009440	MRPS23	67	41.538	Pan_troglodytes
FBgn0260407	mRpS23	65	40.000	ENSPANG00000022309	MRPS23	67	40.000	Papio_anubis
FBgn0260407	mRpS23	65	44.275	ENSPKIG00000010021	mrps23	70	44.275	Paramormyrops_kingsleyae
FBgn0260407	mRpS23	61	45.968	ENSPMGG00000010519	mrps23	69	45.968	Periophthalmus_magnuspinnatus
FBgn0260407	mRpS23	65	39.231	ENSPEMG00000016423	Mrps23	73	47.368	Peromyscus_maniculatus_bairdii
FBgn0260407	mRpS23	65	40.769	ENSPPYG00000025941	MRPS23	67	40.769	Pongo_abelii
FBgn0260407	mRpS23	78	33.758	ENSPCAG00000012145	MRPS23	82	33.758	Procavia_capensis
FBgn0260407	mRpS23	65	41.538	ENSPCOG00000024615	MRPS23	67	41.538	Propithecus_coquereli
FBgn0260407	mRpS23	65	42.308	ENSPVAG00000000514	MRPS23	67	42.308	Pteropus_vampyrus
FBgn0260407	mRpS23	65	38.931	ENSPNYG00000019983	mrps23	73	38.931	Pundamilia_nyererei
FBgn0260407	mRpS23	65	42.537	ENSPNAG00000015802	mrps23	69	42.537	Pygocentrus_nattereri
FBgn0260407	mRpS23	65	40.769	ENSRNOG00000010363	Mrps23	72	40.769	Rattus_norvegicus
FBgn0260407	mRpS23	65	40.000	ENSRBIG00000029694	MRPS23	67	40.000	Rhinopithecus_bieti
FBgn0260407	mRpS23	65	40.000	ENSRROG00000035057	MRPS23	67	40.000	Rhinopithecus_roxellana
FBgn0260407	mRpS23	65	40.000	ENSSBOG00000031201	MRPS23	85	40.000	Saimiri_boliviensis_boliviensis
FBgn0260407	mRpS23	65	42.748	ENSSHAG00000006619	MRPS23	87	42.748	Sarcophilus_harrisii
FBgn0260407	mRpS23	93	38.587	ENSSFOG00015012158	mrps23	95	38.587	Scleropages_formosus
FBgn0260407	mRpS23	65	43.182	ENSSMAG00000004026	-	68	43.182	Scophthalmus_maximus
FBgn0260407	mRpS23	65	42.308	ENSSDUG00000021990	-	71	42.308	Seriola_dumerili
FBgn0260407	mRpS23	51	43.137	ENSSLDG00000004069	-	86	43.137	Seriola_lalandi_dorsalis
FBgn0260407	mRpS23	65	43.077	ENSSLDG00000023950	-	71	43.077	Seriola_lalandi_dorsalis
FBgn0260407	mRpS23	65	40.152	ENSSPUG00000000886	MRPS23	73	40.152	Sphenodon_punctatus
FBgn0260407	mRpS23	65	42.105	ENSSPAG00000015036	mrps23	74	42.105	Stegastes_partitus
FBgn0260407	mRpS23	65	40.000	ENSSSCG00000035193	MRPS23	67	40.000	Sus_scrofa
FBgn0260407	mRpS23	71	43.056	ENSTRUG00000022373	mrps23	75	43.056	Takifugu_rubripes
FBgn0260407	mRpS23	71	42.254	ENSTRUG00000003312	-	74	42.254	Takifugu_rubripes
FBgn0260407	mRpS23	65	39.535	ENSTTRG00000017158	MRPS23	67	39.535	Tursiops_truncatus
FBgn0260407	mRpS23	65	38.760	ENSUAMG00000014335	MRPS23	88	38.760	Ursus_americanus
FBgn0260407	mRpS23	65	38.760	ENSUMAG00000000494	MRPS23	67	38.760	Ursus_maritimus
FBgn0260407	mRpS23	65	40.000	ENSVVUG00000011827	MRPS23	58	40.000	Vulpes_vulpes
FBgn0260407	mRpS23	65	44.697	ENSXETG00000016140	mrps23	72	43.511	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	17927810.	TAS	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process