EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0260771 (Gene tree)
Gene ID: 44900
Gene Symbol: Larp7
Alias: -
Full Name: La related protein 7
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2109 bases
Position: chrX:9243817-9245925
Accession: FBgn0260771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0290490	RRM_1	PF00076.22	2.2e-14	1	1
FBpp0290490	RRM_3	PF08777.11	1.4e-11	1	1
FBpp0290490	La	PF05383.17	4.5e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0301275	-	2049	-	FBpp0290490	595 (aa)	-	Q7KJ96

Gene Model

Click here to download FBgn0260771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0260771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0260771	Larp7	70	38.889	ENSAPOG00000014570	larp7	68	38.889	Acanthochromis_polyacanthus
FBgn0260771	Larp7	67	42.138	ENSAOCG00000016160	larp7	58	40.000	Amphiprion_ocellaris
FBgn0260771	Larp7	71	41.111	ENSAPLG00000012887	LARP7	65	41.111	Anas_platyrhynchos
FBgn0260771	Larp7	66	43.506	ENSACAG00000010662	LARP7	58	43.590	Anolis_carolinensis
FBgn0260771	Larp7	67	42.949	ENSBTAG00000009632	LARP7	67	42.458	Bos_taurus
FBgn0260771	Larp7	67	42.949	ENSCHIG00000014163	-	67	41.111	Capra_hircus
FBgn0260771	Larp7	67	42.949	ENSCATG00000043535	LARP7	66	40.678	Cercocebus_atys
FBgn0260771	Larp7	67	42.949	ENSCANG00000031482	LARP7	66	40.678	Colobus_angolensis_palliatus
FBgn0260771	Larp7	80	40.223	ENSCSEG00000009088	larp7	54	40.223	Cynoglossus_semilaevis
FBgn0260771	Larp7	54	38.150	ENSCVAG00000016852	larp7	73	39.286	Cyprinodon_variegatus
FBgn0260771	Larp7	70	41.477	ENSDARG00000017315	larp7	67	41.477	Danio_rerio
FBgn0260771	Larp7	67	43.590	ENSETEG00000011692	LARP7	53	42.353	Echinops_telfairi
FBgn0260771	Larp7	66	41.509	ENSELUG00000015341	larp7	69	41.509	Esox_lucius
FBgn0260771	Larp7	67	42.949	ENSFCAG00000031966	LARP7	68	41.989	Felis_catus
FBgn0260771	Larp7	83	43.506	ENSFALG00000000972	LARP7	83	41.341	Ficedula_albicollis
FBgn0260771	Larp7	54	38.596	ENSFHEG00000021652	larp7	61	38.596	Fundulus_heteroclitus
FBgn0260771	Larp7	52	39.227	ENSGMOG00000010536	larp7	58	39.888	Gadus_morhua
FBgn0260771	Larp7	67	43.506	ENSGALG00000012048	LARP7	66	40.000	Gallus_gallus
FBgn0260771	Larp7	67	43.396	ENSGACG00000019618	larp7	70	43.396	Gasterosteus_aculeatus
FBgn0260771	Larp7	71	40.678	ENSIPUG00000019886	larp7	57	40.678	Ictalurus_punctatus
FBgn0260771	Larp7	82	38.889	ENSLBEG00000020062	larp7	69	38.889	Labrus_bergylta
FBgn0260771	Larp7	67	37.821	ENSLACG00000013744	LARP7	60	37.821	Latimeria_chalumnae
FBgn0260771	Larp7	67	42.949	ENSMFAG00000036506	LARP7	63	42.949	Macaca_fascicularis
FBgn0260771	Larp7	67	42.949	ENSMMUG00000017911	LARP7	66	40.678	Macaca_mulatta
FBgn0260771	Larp7	67	42.949	ENSMNEG00000034758	LARP7	66	40.678	Macaca_nemestrina
FBgn0260771	Larp7	67	42.949	ENSMLEG00000026154	LARP7	66	40.678	Mandrillus_leucophaeus
FBgn0260771	Larp7	51	40.805	ENSMAMG00000005835	larp7	56	40.805	Mastacembelus_armatus
FBgn0260771	Larp7	66	43.421	ENSMOCG00000012519	-	65	42.012	Microtus_ochrogaster
FBgn0260771	Larp7	57	42.574	ENSMLUG00000027214	LARP7	50	42.574	Myotis_lucifugus
FBgn0260771	Larp7	67	43.506	ENSNGAG00000007368	-	64	43.590	Nannospalax_galili
FBgn0260771	Larp7	67	42.949	ENSOGAG00000001643	LARP7	67	41.436	Otolemur_garnettii
FBgn0260771	Larp7	67	42.949	ENSOARG00000001809	LARP7	67	41.111	Ovis_aries
FBgn0260771	Larp7	67	42.949	ENSPPRG00000023256	LARP7	67	41.989	Panthera_pardus
FBgn0260771	Larp7	65	42.949	ENSPTIG00000021146	LARP7	63	41.989	Panthera_tigris_altaica
FBgn0260771	Larp7	67	42.949	ENSPANG00000006701	LARP7	66	40.678	Papio_anubis
FBgn0260771	Larp7	50	43.169	ENSPKIG00000023484	larp7	53	43.333	Paramormyrops_kingsleyae
FBgn0260771	Larp7	54	39.881	ENSPFOG00000000265	larp7	60	39.881	Poecilia_formosa
FBgn0260771	Larp7	67	42.949	ENSRROG00000033414	LARP7	66	40.678	Rhinopithecus_roxellana
FBgn0260771	Larp7	50	44.898	ENSSFOG00015019344	larp7	55	44.898	Scleropages_formosus
FBgn0260771	Larp7	72	39.362	ENSSDUG00000007045	larp7	56	40.341	Seriola_dumerili
FBgn0260771	Larp7	72	40.323	ENSXETG00000024097	larp7	66	40.323	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0097322	7SK snRNA binding	22379134.	IDA	Function
GO:1990904	ribonucleoprotein complex	-	IEA	Component