EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0260794 (Gene tree)
Gene ID: 40596
Gene Symbol: ctrip
Alias: -
Full Name: circadian trip
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 25813
Position: chr3R: 4786284-4812096
Accession: FBgn0260794
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0334902	-	10136	-	FBpp0306923	2736 (aa)	-	A0A0B4JCV6
FBtr0334903	-	10831	-	FBpp0306924	2929 (aa)	-	A0A0B4JCW5
FBtr0344030	-	9291	-	FBpp0310479	2708 (aa)	-	A0A0B4JD62
FBtr0344028	-	10593	-	FBpp0310477	3111 (aa)	-	A0A0B4LGR2
FBtr0344029	-	10631	-	FBpp0310478	2901 (aa)	-	A0A0B4LGQ5
FBtr0303912	-	9366	-	FBpp0292915	2737 (aa)	-	A0A0B4JCW5
FBtr0303911	-	10587	-	FBpp0292914	3140 (aa)	-	F6M9W0
FBtr0303917	-	9378	-	FBpp0292920	2737 (aa)	-	A0A0B4JDB5
FBtr0301437	-	10589	-	FBpp0290652	3140 (aa)	-	Q9VN58
FBtr0303915	-	10759	-	FBpp0292918	3139 (aa)	-	A0A0B4JDA1
FBtr0303914	-	9957	-	FBpp0292917	2930 (aa)	-	A0A0B4JCV6

Gene Model

Click here to download FBgn0260794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0260794's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004842	ubiquitin-protein transferase activity	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0006511	ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	ISS	Process
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0042753	positive regulation of circadian rhythm	21525955.	IMP	Process
GO:0045732	positive regulation of protein catabolic process	21525955.	IMP	Process
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	21873635.	IBA	Process