EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0260962 (Gene tree)
Gene ID: 41611
Gene Symbol: pic
Alias: -
Full Name: piccolo
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 4481 bases
Position: chr3R:13052245-13056725
Accession: FBgn0260962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082177	CPSF_A	PF03178.15	5e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082709	-	3881	-	FBpp0082177	1140 (aa)	-	Q9XYZ5

Gene Model

Click here to download FBgn0260962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0260962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0260962	pic	100	60.839	ENSG00000167986	DDB1	100	61.048	Homo_sapiens
FBgn0260962	pic	98	60.858	ENSAPOG00000005036	ddb1	99	61.015	Acanthochromis_polyacanthus
FBgn0260962	pic	100	60.839	ENSAMEG00000016518	DDB1	100	61.048	Ailuropoda_melanoleuca
FBgn0260962	pic	86	60.914	ENSACIG00000020624	ddb1	99	60.914	Amphilophus_citrinellus
FBgn0260962	pic	100	60.437	ENSAOCG00000003066	ddb1	100	60.437	Amphiprion_ocellaris
FBgn0260962	pic	100	60.437	ENSAPEG00000000092	ddb1	100	60.437	Amphiprion_percula
FBgn0260962	pic	94	61.132	ENSATEG00000020571	ddb1	97	61.132	Anabas_testudineus
FBgn0260962	pic	98	60.619	ENSAPLG00000007174	DDB1	99	60.619	Anas_platyrhynchos
FBgn0260962	pic	100	60.506	ENSACAG00000017758	DDB1	100	60.714	Anolis_carolinensis
FBgn0260962	pic	100	60.839	ENSANAG00000021878	DDB1	100	61.048	Aotus_nancymaae
FBgn0260962	pic	100	60.524	ENSACLG00000012401	ddb1	100	60.524	Astatotilapia_calliptera
FBgn0260962	pic	100	60.752	ENSBTAG00000021569	DDB1	93	60.961	Bos_taurus
FBgn0260962	pic	100	36.168	WBGene00010890	ddb-1	100	36.168	Caenorhabditis_elegans
FBgn0260962	pic	100	60.839	ENSCJAG00000019319	DDB1	100	61.048	Callithrix_jacchus
FBgn0260962	pic	100	60.839	ENSCAFG00000016264	DDB1	100	61.048	Canis_familiaris
FBgn0260962	pic	94	61.467	ENSCAFG00020012722	DDB1	99	61.688	Canis_lupus_dingo
FBgn0260962	pic	100	60.752	ENSCHIG00000014969	DDB1	100	60.961	Capra_hircus
FBgn0260962	pic	100	60.577	ENSTSYG00000008027	DDB1	100	60.786	Carlito_syrichta
FBgn0260962	pic	98	60.463	ENSCAPG00000010786	DDB1	100	60.676	Cavia_aperea
FBgn0260962	pic	100	60.752	ENSCPOG00000009956	DDB1	100	60.961	Cavia_porcellus
FBgn0260962	pic	100	60.839	ENSCCAG00000035883	DDB1	100	61.048	Cebus_capucinus
FBgn0260962	pic	100	58.910	ENSCATG00000044495	DDB1	100	59.205	Cercocebus_atys
FBgn0260962	pic	100	60.664	ENSCLAG00000004126	DDB1	100	60.873	Chinchilla_lanigera
FBgn0260962	pic	100	60.839	ENSCSAG00000006392	DDB1	100	61.048	Chlorocebus_sabaeus
FBgn0260962	pic	88	60.075	ENSCHOG00000011377	DDB1	90	60.526	Choloepus_hoffmanni
FBgn0260962	pic	100	60.664	ENSCPBG00000017728	DDB1	100	60.873	Chrysemys_picta_bellii
FBgn0260962	pic	100	54.113	ENSCING00000007437	-	100	54.113	Ciona_intestinalis
FBgn0260962	pic	94	52.078	ENSCSAVG00000004783	-	99	52.078	Ciona_savignyi
FBgn0260962	pic	100	60.839	ENSCANG00000019948	DDB1	100	61.048	Colobus_angolensis_palliatus
FBgn0260962	pic	100	60.839	ENSCGRG00001016599	Ddb1	100	61.048	Cricetulus_griseus_chok1gshd
FBgn0260962	pic	100	60.839	ENSCGRG00000013427	Ddb1	100	61.048	Cricetulus_griseus_crigri
FBgn0260962	pic	93	61.069	ENSCSEG00000012499	ddb1	99	60.181	Cynoglossus_semilaevis
FBgn0260962	pic	94	60.853	ENSCVAG00000019531	ddb1	99	60.853	Cyprinodon_variegatus
FBgn0260962	pic	100	59.182	ENSDARG00000074431	ddb1	100	59.182	Danio_rerio
FBgn0260962	pic	94	61.467	ENSDNOG00000014884	DDB1	97	61.688	Dasypus_novemcinctus
FBgn0260962	pic	84	61.247	ENSDORG00000000127	Ddb1	100	61.570	Dipodomys_ordii
FBgn0260962	pic	65	79.412	ENSETEG00000001053	-	71	57.600	Echinops_telfairi
FBgn0260962	pic	78	58.903	ENSEBUG00000014593	ddb1	97	59.015	Eptatretus_burgeri
FBgn0260962	pic	100	60.839	ENSEASG00005008184	DDB1	100	61.048	Equus_asinus_asinus
FBgn0260962	pic	100	60.839	ENSECAG00000012136	DDB1	100	61.048	Equus_caballus
FBgn0260962	pic	85	61.307	ENSEEUG00000003194	DDB1	85	61.706	Erinaceus_europaeus
FBgn0260962	pic	100	60.437	ENSELUG00000023868	ddb1	100	60.437	Esox_lucius
FBgn0260962	pic	100	60.839	ENSFCAG00000029716	DDB1	100	61.048	Felis_catus
FBgn0260962	pic	100	60.643	ENSFALG00000011981	DDB1	100	60.643	Ficedula_albicollis
FBgn0260962	pic	100	60.839	ENSFDAG00000005128	DDB1	100	61.048	Fukomys_damarensis
FBgn0260962	pic	90	63.529	ENSFHEG00000022133	ddb1	99	63.529	Fundulus_heteroclitus
FBgn0260962	pic	79	61.538	ENSGMOG00000019386	ddb1	94	61.538	Gadus_morhua
FBgn0260962	pic	100	60.839	ENSGALG00000042333	DDB1	100	60.839	Gallus_gallus
FBgn0260962	pic	94	60.946	ENSGAFG00000013142	ddb1	99	60.946	Gambusia_affinis
FBgn0260962	pic	96	60.128	ENSGACG00000017182	ddb1	100	60.128	Gasterosteus_aculeatus
FBgn0260962	pic	95	60.497	ENSGAGG00000014124	DDB1	99	60.718	Gopherus_agassizii
FBgn0260962	pic	100	60.839	ENSGGOG00000004052	DDB1	100	61.048	Gorilla_gorilla
FBgn0260962	pic	100	60.524	ENSHBUG00000008873	ddb1	100	60.524	Haplochromis_burtoni
FBgn0260962	pic	100	60.490	ENSHGLG00000018430	DDB1	100	60.699	Heterocephalus_glaber_female
FBgn0260962	pic	100	59.965	ENSHGLG00100014475	DDB1	100	60.175	Heterocephalus_glaber_male
FBgn0260962	pic	94	60.962	ENSHCOG00000018670	ddb1	98	60.962	Hippocampus_comes
FBgn0260962	pic	100	60.873	ENSIPUG00000005612	DDB1	100	60.873	Ictalurus_punctatus
FBgn0260962	pic	100	60.839	ENSSTOG00000007552	DDB1	100	61.048	Ictidomys_tridecemlineatus
FBgn0260962	pic	100	60.664	ENSJJAG00000017769	Ddb1	100	60.873	Jaculus_jaculus
FBgn0260962	pic	94	60.668	ENSKMAG00000002315	ddb1	99	60.668	Kryptolebias_marmoratus
FBgn0260962	pic	84	60.455	ENSLBEG00000017065	ddb1	99	60.455	Labrus_bergylta
FBgn0260962	pic	100	60.593	ENSLACG00000017611	DDB1	100	60.661	Latimeria_chalumnae
FBgn0260962	pic	90	60.748	ENSLOCG00000000012	ddb1	99	60.748	Lepisosteus_oculatus
FBgn0260962	pic	100	60.664	ENSLAFG00000011513	DDB1	100	60.873	Loxodonta_africana
FBgn0260962	pic	100	60.839	ENSMFAG00000042035	DDB1	100	61.048	Macaca_fascicularis
FBgn0260962	pic	99	60.793	ENSMMUG00000002691	DDB1	99	61.004	Macaca_mulatta
FBgn0260962	pic	100	60.839	ENSMNEG00000031559	DDB1	100	61.048	Macaca_nemestrina
FBgn0260962	pic	100	60.839	ENSMLEG00000044136	DDB1	100	61.048	Mandrillus_leucophaeus
FBgn0260962	pic	100	60.524	ENSMAMG00000014372	ddb1	100	60.524	Mastacembelus_armatus
FBgn0260962	pic	100	60.524	ENSMZEG00005013835	ddb1	100	60.524	Maylandia_zebra
FBgn0260962	pic	94	60.946	ENSMGAG00000004990	DDB1	99	60.946	Meleagris_gallopavo
FBgn0260962	pic	100	60.839	ENSMAUG00000012926	Ddb1	100	61.048	Mesocricetus_auratus
FBgn0260962	pic	100	60.839	ENSMICG00000013703	DDB1	100	61.048	Microcebus_murinus
FBgn0260962	pic	100	60.839	ENSMOCG00000020499	Ddb1	100	61.048	Microtus_ochrogaster
FBgn0260962	pic	86	60.914	ENSMMOG00000001758	ddb1	99	60.914	Mola_mola
FBgn0260962	pic	100	55.910	ENSMODG00000020353	DDB1	100	56.121	Monodelphis_domestica
FBgn0260962	pic	100	60.524	ENSMALG00000014071	ddb1	100	60.524	Monopterus_albus
FBgn0260962	pic	100	60.839	MGP_CAROLIEiJ_G0022695	Ddb1	100	61.048	Mus_caroli
FBgn0260962	pic	100	60.839	ENSMUSG00000024740	Ddb1	100	61.048	Mus_musculus
FBgn0260962	pic	100	60.839	MGP_PahariEiJ_G0014189	Ddb1	100	61.048	Mus_pahari
FBgn0260962	pic	100	60.839	MGP_SPRETEiJ_G0023609	Ddb1	100	61.048	Mus_spretus
FBgn0260962	pic	100	58.566	ENSMPUG00000014200	DDB1	100	58.777	Mustela_putorius_furo
FBgn0260962	pic	100	60.664	ENSMLUG00000013232	DDB1	100	60.873	Myotis_lucifugus
FBgn0260962	pic	100	60.786	ENSNGAG00000009384	Ddb1	100	60.786	Nannospalax_galili
FBgn0260962	pic	100	60.524	ENSNBRG00000019581	ddb1	100	60.524	Neolamprologus_brichardi
FBgn0260962	pic	100	58.722	ENSNLEG00000002022	DDB1	100	58.930	Nomascus_leucogenys
FBgn0260962	pic	89	63.028	ENSMEUG00000001099	DDB1	92	63.028	Notamacropus_eugenii
FBgn0260962	pic	90	55.749	ENSOPRG00000008254	DDB1	90	55.985	Ochotona_princeps
FBgn0260962	pic	100	60.577	ENSODEG00000002419	DDB1	100	60.786	Octodon_degus
FBgn0260962	pic	100	60.524	ENSONIG00000005804	ddb1	100	60.524	Oreochromis_niloticus
FBgn0260962	pic	90	60.870	ENSOANG00000004897	DDB1	99	61.100	Ornithorhynchus_anatinus
FBgn0260962	pic	100	60.839	ENSOCUG00000001667	DDB1	100	61.048	Oryctolagus_cuniculus
FBgn0260962	pic	94	61.132	ENSORLG00000001399	ddb1	98	61.472	Oryzias_latipes
FBgn0260962	pic	94	61.132	ENSORLG00020001277	ddb1	95	61.132	Oryzias_latipes_hni
FBgn0260962	pic	94	61.132	ENSORLG00015002080	ddb1	98	61.132	Oryzias_latipes_hsok
FBgn0260962	pic	96	59.982	ENSOMEG00000006181	ddb1	99	59.982	Oryzias_melastigma
FBgn0260962	pic	100	60.752	ENSOGAG00000016103	DDB1	100	60.961	Otolemur_garnettii
FBgn0260962	pic	98	61.235	ENSOARG00000011716	DDB1	97	61.449	Ovis_aries
FBgn0260962	pic	100	60.839	ENSPPAG00000035343	DDB1	100	61.048	Pan_paniscus
FBgn0260962	pic	100	60.839	ENSPPRG00000013300	DDB1	100	61.048	Panthera_pardus
FBgn0260962	pic	98	60.552	ENSPTIG00000006909	DDB1	98	60.765	Panthera_tigris_altaica
FBgn0260962	pic	100	60.839	ENSPTRG00000003737	DDB1	100	61.048	Pan_troglodytes
FBgn0260962	pic	100	60.839	ENSPANG00000000242	DDB1	100	61.048	Papio_anubis
FBgn0260962	pic	95	61.368	ENSPKIG00000019213	ddb1	94	61.368	Paramormyrops_kingsleyae
FBgn0260962	pic	98	60.550	ENSPSIG00000013275	DDB1	100	60.762	Pelodiscus_sinensis
FBgn0260962	pic	86	60.812	ENSPMGG00000021179	ddb1	99	60.812	Periophthalmus_magnuspinnatus
FBgn0260962	pic	100	60.839	ENSPEMG00000012241	Ddb1	100	61.048	Peromyscus_maniculatus_bairdii
FBgn0260962	pic	89	60.372	ENSPMAG00000008479	ddb1	100	60.372	Petromyzon_marinus
FBgn0260962	pic	100	60.839	ENSPCIG00000002643	DDB1	100	61.048	Phascolarctos_cinereus
FBgn0260962	pic	100	60.471	ENSPFOG00000002768	ddb1	100	60.471	Poecilia_formosa
FBgn0260962	pic	100	60.437	ENSPLAG00000017227	ddb1	100	60.437	Poecilia_latipinna
FBgn0260962	pic	100	60.437	ENSPMEG00000011398	ddb1	100	60.437	Poecilia_mexicana
FBgn0260962	pic	90	66.216	ENSPREG00000004440	ddb1	97	66.216	Poecilia_reticulata
FBgn0260962	pic	100	58.818	ENSPPYG00000003193	DDB1	100	58.818	Pongo_abelii
FBgn0260962	pic	84	61.664	ENSPCAG00000011040	DDB1	84	62.018	Procavia_capensis
FBgn0260962	pic	100	60.297	ENSPCOG00000015176	DDB1	100	60.506	Propithecus_coquereli
FBgn0260962	pic	100	60.752	ENSPVAG00000003847	DDB1	100	60.961	Pteropus_vampyrus
FBgn0260962	pic	94	61.317	ENSPNAG00000006635	ddb1	97	61.317	Pygocentrus_nattereri
FBgn0260962	pic	100	60.927	ENSRNOG00000020715	Ddb1	100	61.135	Rattus_norvegicus
FBgn0260962	pic	100	60.839	ENSRBIG00000033611	DDB1	100	61.048	Rhinopithecus_bieti
FBgn0260962	pic	100	60.839	ENSRROG00000041407	DDB1	100	61.048	Rhinopithecus_roxellana
FBgn0260962	pic	100	60.839	ENSSBOG00000019775	DDB1	100	61.048	Saimiri_boliviensis_boliviensis
FBgn0260962	pic	94	59.795	ENSSHAG00000011600	DDB1	99	60.019	Sarcophilus_harrisii
FBgn0260962	pic	94	61.240	ENSSFOG00015011151	ddb1	97	61.240	Scleropages_formosus
FBgn0260962	pic	100	60.611	ENSSMAG00000009495	ddb1	100	60.611	Scophthalmus_maximus
FBgn0260962	pic	100	60.524	ENSSDUG00000004642	ddb1	100	60.524	Seriola_dumerili
FBgn0260962	pic	100	60.524	ENSSLDG00000015804	ddb1	100	60.524	Seriola_lalandi_dorsalis
FBgn0260962	pic	70	60.952	ENSSARG00000003290	-	72	60.952	Sorex_araneus
FBgn0260962	pic	100	60.839	ENSSPUG00000019338	DDB1	100	61.048	Sphenodon_punctatus
FBgn0260962	pic	95	60.550	ENSSPAG00000009888	ddb1	100	60.550	Stegastes_partitus
FBgn0260962	pic	100	60.227	ENSSSCG00000013094	DDB1	100	60.437	Sus_scrofa
FBgn0260962	pic	100	60.540	ENSTGUG00000006414	DDB1	100	60.540	Taeniopygia_guttata
FBgn0260962	pic	95	60.351	ENSTRUG00000016682	ddb1	99	60.407	Takifugu_rubripes
FBgn0260962	pic	88	58.052	ENSTNIG00000009565	ddb1	99	58.109	Tetraodon_nigroviridis
FBgn0260962	pic	92	60.519	ENSTTRG00000011055	DDB1	94	60.519	Tursiops_truncatus
FBgn0260962	pic	94	61.467	ENSUAMG00000017793	DDB1	93	61.688	Ursus_americanus
FBgn0260962	pic	94	61.467	ENSUMAG00000011788	DDB1	98	61.688	Ursus_maritimus
FBgn0260962	pic	90	57.605	ENSVPAG00000007963	DDB1	92	57.866	Vicugna_pacos
FBgn0260962	pic	100	60.839	ENSVVUG00000004987	DDB1	100	61.890	Vulpes_vulpes
FBgn0260962	pic	100	60.261	ENSXETG00000008820	ddb1	100	60.261	Xenopus_tropicalis
FBgn0260962	pic	86	60.812	ENSXCOG00000013956	ddb1	99	60.812	Xiphophorus_couchianus
FBgn0260962	pic	94	60.946	ENSXMAG00000000022	ddb1	99	60.946	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003684	damaged DNA binding	21873635.	IBA	Function
GO:0005515	protein binding	18381890.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	ISS	Process
GO:0006974	cellular response to DNA damage stimulus	16428319.	IMP	Process
GO:0007307	eggshell chorion gene amplification	19531585.	IDA	Process
GO:0016567	protein ubiquitination	18381890.	IDA	Process
GO:0016567	protein ubiquitination	29930086.	IMP	Process
GO:0035220	wing disc development	16428319.	IMP	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	18381890.	TAS	Process
GO:0045732	positive regulation of protein catabolic process	18381890.	IMP	Process
GO:0045879	negative regulation of smoothened signaling pathway	29930086.	IMP	Process
GO:0050832	defense response to fungus	18833296.	IMP	Process