EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0261065 (Gene tree)
Gene ID
42240
Gene Symbol
Cpsf73
Alias
-
Full Name
Cleavage and polyadenylation specificity factor 73
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
putative
Strand
Minus strand
Length
2432 bases
Position
chr3R:18661121-18663552
Accession
FBgn0261065
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0083105CPSF73-100_CPF11718.81e-4311
FBpp0083105Beta-CaspPF10996.83.7e-3311
FBpp0083105Lactamase_BPF00753.273.1e-1611
FBpp0083105RMMBLPF07521.122.4e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0083690-2190-FBpp0083105684 (aa)-Q9VE51
Gene Model
Click here to download FBgn0261065's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0261065's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0261065Cpsf736538.987FBgn0039691IntS117438.987
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0261065Cpsf739867.305ENSG00000119203CPSF310080.147Homo_sapiens
FBgn0261065Cpsf737576.265ENSAPOG00000012241CPSF39276.265Acanthochromis_polyacanthus
FBgn0261065Cpsf739966.862ENSAPOG00000022087cpsf39966.862Acanthochromis_polyacanthus
FBgn0261065Cpsf739867.599ENSAMEG00000008493CPSF39967.599Ailuropoda_melanoleuca
FBgn0261065Cpsf739064.480ENSACIG00000023663CPSF39864.480Amphilophus_citrinellus
FBgn0261065Cpsf739164.960ENSACIG00000009846cpsf39864.960Amphilophus_citrinellus
FBgn0261065Cpsf739966.327ENSAOCG00000010077CPSF39966.327Amphiprion_ocellaris
FBgn0261065Cpsf739966.716ENSAOCG00000022056cpsf39670.098Amphiprion_ocellaris
FBgn0261065Cpsf739966.327ENSAPEG00000021167CPSF39966.327Amphiprion_percula
FBgn0261065Cpsf739966.862ENSAPEG00000019526cpsf39868.252Amphiprion_percula
FBgn0261065Cpsf739967.305ENSATEG00000003959cpsf39967.305Anabas_testudineus
FBgn0261065Cpsf739864.349ENSATEG00000014525CPSF39864.402Anabas_testudineus
FBgn0261065Cpsf739767.115ENSAPLG00000006941CPSF39867.115Anas_platyrhynchos
FBgn0261065Cpsf739165.300ENSACAG00000001759CPSF39965.300Anolis_carolinensis
FBgn0261065Cpsf739863.127ENSANAG00000031254CPSF39963.127Aotus_nancymaae
FBgn0261065Cpsf739064.058ENSACLG00000018846CPSF39864.058Astatotilapia_calliptera
FBgn0261065Cpsf739767.922ENSACLG00000014484cpsf39967.922Astatotilapia_calliptera
FBgn0261065Cpsf739965.839ENSAMXG00000004786cpsf39965.839Astyanax_mexicanus
FBgn0261065Cpsf739867.599ENSBTAG00000019735CPSF39967.599Bos_taurus
FBgn0261065Cpsf738558.794WBGene00013460cpsf-38458.794Caenorhabditis_elegans
FBgn0261065Cpsf739867.158ENSCJAG00000006276CPSF39967.158Callithrix_jacchus
FBgn0261065Cpsf739867.599ENSCAFG00000003375CPSF39467.599Canis_familiaris
FBgn0261065Cpsf738870.930ENSCAFG00020026799CPSF39770.930Canis_lupus_dingo
FBgn0261065Cpsf739867.599ENSCHIG00000013973CPSF39967.599Capra_hircus
FBgn0261065Cpsf739867.305ENSTSYG00000002967CPSF39967.305Carlito_syrichta
FBgn0261065Cpsf739667.218ENSCAPG00000013851CPSF39967.218Cavia_aperea
FBgn0261065Cpsf739867.305ENSCPOG00000011299CPSF39967.305Cavia_porcellus
FBgn0261065Cpsf739867.158ENSCCAG00000036730CPSF39967.158Cebus_capucinus
FBgn0261065Cpsf739866.912ENSCATG00000014770CPSF39973.183Cercocebus_atys
FBgn0261065Cpsf739867.158ENSCLAG00000002727CPSF39967.158Chinchilla_lanigera
FBgn0261065Cpsf739860.530ENSCSAG00000007125CPSF39960.530Chlorocebus_sabaeus
FBgn0261065Cpsf737151.633ENSCHOG00000000180CPSF37351.633Choloepus_hoffmanni
FBgn0261065Cpsf739966.618ENSCPBG00000014074CPSF39966.618Chrysemys_picta_bellii
FBgn0261065Cpsf739861.743ENSCING00000007214-9761.743Ciona_intestinalis
FBgn0261065Cpsf739860.352ENSCANG00000034435CPSF39960.352Colobus_angolensis_palliatus
FBgn0261065Cpsf739867.158ENSCGRG00001013134Cpsf39967.158Cricetulus_griseus_chok1gshd
FBgn0261065Cpsf739867.158ENSCGRG00000018319Cpsf39967.158Cricetulus_griseus_crigri
FBgn0261065Cpsf739966.032ENSCSEG00000002021CPSF39966.147Cynoglossus_semilaevis
FBgn0261065Cpsf739965.839ENSCVAG00000015067CPSF39965.839Cyprinodon_variegatus
FBgn0261065Cpsf739966.087ENSDARG00000027649cpsf39966.087Danio_rerio
FBgn0261065Cpsf739965.942ENSDNOG00000008940CPSF39665.942Dasypus_novemcinctus
FBgn0261065Cpsf739468.875ENSDORG00000014263Cpsf39968.875Dipodomys_ordii
FBgn0261065Cpsf739458.398ENSETEG00000003893CPSF39958.398Echinops_telfairi
FBgn0261065Cpsf739567.786ENSEBUG00000009018cpsf39267.786Eptatretus_burgeri
FBgn0261065Cpsf739867.599ENSEASG00005003970CPSF39967.599Equus_asinus_asinus
FBgn0261065Cpsf739867.599ENSECAG00000019911CPSF39572.603Equus_caballus
FBgn0261065Cpsf739855.523ENSEEUG00000015422CPSF39955.523Erinaceus_europaeus
FBgn0261065Cpsf739966.764ENSELUG00000013775cpsf39966.764Esox_lucius
FBgn0261065Cpsf739867.599ENSFCAG00000007852CPSF39967.599Felis_catus
FBgn0261065Cpsf739366.357ENSFALG00000006572CPSF39966.357Ficedula_albicollis
FBgn0261065Cpsf739866.863ENSFDAG00000006317CPSF39866.863Fukomys_damarensis
FBgn0261065Cpsf735845.946ENSFHEG00000012186CPSF39945.946Fundulus_heteroclitus
FBgn0261065Cpsf739965.786ENSFHEG00000014774cpsf39965.786Fundulus_heteroclitus
FBgn0261065Cpsf739966.471ENSGMOG00000003157cpsf39866.471Gadus_morhua
FBgn0261065Cpsf739966.570ENSGALG00000016424CPSF39966.570Gallus_gallus
FBgn0261065Cpsf739064.620ENSGAFG00000019449cpsf39864.620Gambusia_affinis
FBgn0261065Cpsf739965.893ENSGAFG00000008016CPSF39965.893Gambusia_affinis
FBgn0261065Cpsf736760.385ENSGAGG00000025583CPSF39260.385Gopherus_agassizii
FBgn0261065Cpsf739865.706ENSGGOG00000001757CPSF39876.000Gorilla_gorilla
FBgn0261065Cpsf739967.841ENSHBUG00000001188cpsf39967.841Haplochromis_burtoni
FBgn0261065Cpsf735857.320ENSHBUG00000014332CPSF39957.320Haplochromis_burtoni
FBgn0261065Cpsf739866.863ENSHGLG00000000666CPSF39866.863Heterocephalus_glaber_female
FBgn0261065Cpsf739866.863ENSHGLG00100007765CPSF39866.863Heterocephalus_glaber_male
FBgn0261065Cpsf739865.731ENSHCOG00000015957CPSF39765.731Hippocampus_comes
FBgn0261065Cpsf739966.962ENSHCOG00000007251cpsf39866.962Hippocampus_comes
FBgn0261065Cpsf739966.618ENSIPUG00000023488cpsf39966.618Ictalurus_punctatus
FBgn0261065Cpsf739867.452ENSSTOG00000004476CPSF39967.452Ictidomys_tridecemlineatus
FBgn0261065Cpsf739866.814ENSJJAG00000023415Cpsf39966.814Jaculus_jaculus
FBgn0261065Cpsf739966.035ENSKMAG00000007317CPSF39966.035Kryptolebias_marmoratus
FBgn0261065Cpsf739965.836ENSKMAG00000002806cpsf39965.836Kryptolebias_marmoratus
FBgn0261065Cpsf739962.463ENSLBEG00000020569cpsf39562.757Labrus_bergylta
FBgn0261065Cpsf735459.677ENSLBEG00000015018-9959.677Labrus_bergylta
FBgn0261065Cpsf739468.056ENSLBEG00000013492CPSF39868.056Labrus_bergylta
FBgn0261065Cpsf739961.426ENSLACG00000008308CPSF39961.426Latimeria_chalumnae
FBgn0261065Cpsf739965.988ENSLOCG00000016823cpsf39965.988Lepisosteus_oculatus
FBgn0261065Cpsf739866.913ENSLAFG00000009467CPSF39966.913Loxodonta_africana
FBgn0261065Cpsf739867.158ENSMFAG00000001339CPSF39876.200Macaca_fascicularis
FBgn0261065Cpsf739366.512ENSMMUG00000018038CPSF39277.917Macaca_mulatta
FBgn0261065Cpsf739850.805ENSMNEG00000039447CPSF39950.805Macaca_nemestrina
FBgn0261065Cpsf739867.305ENSMLEG00000026825CPSF39279.614Mandrillus_leucophaeus
FBgn0261065Cpsf739966.421ENSMAMG00000003076cpsf39866.421Mastacembelus_armatus
FBgn0261065Cpsf739063.462ENSMAMG00000008835CPSF39863.622Mastacembelus_armatus
FBgn0261065Cpsf739967.841ENSMZEG00005014358cpsf39967.841Maylandia_zebra
FBgn0261065Cpsf739866.519ENSMZEG00005006258CPSF39866.519Maylandia_zebra
FBgn0261065Cpsf739667.218ENSMGAG00000013995CPSF39967.218Meleagris_gallopavo
FBgn0261065Cpsf735456.150ENSMAUG00000000166Cpsf39956.150Mesocricetus_auratus
FBgn0261065Cpsf739864.559ENSMICG00000002363CPSF39964.559Microcebus_murinus
FBgn0261065Cpsf739864.697ENSMOCG00000020067Cpsf39964.697Microtus_ochrogaster
FBgn0261065Cpsf739840.675ENSMMOG00000011923CPSF39941.890Mola_mola
FBgn0261065Cpsf739464.688ENSMMOG00000018212CPSF39864.531Mola_mola
FBgn0261065Cpsf739866.763ENSMODG00000014703CPSF39966.763Monodelphis_domestica
FBgn0261065Cpsf739162.618ENSMALG00000011474CPSF39962.618Monopterus_albus
FBgn0261065Cpsf739967.305ENSMALG00000016416cpsf39967.305Monopterus_albus
FBgn0261065Cpsf739867.305MGP_CAROLIEiJ_G0017640Cpsf39967.305Mus_caroli
FBgn0261065Cpsf739867.305ENSMUSG00000054309Cpsf39978.947Mus_musculus
FBgn0261065Cpsf739867.158MGP_PahariEiJ_G0029397Cpsf39967.158Mus_pahari
FBgn0261065Cpsf739867.305MGP_SPRETEiJ_G0018481Cpsf39967.305Mus_spretus
FBgn0261065Cpsf739967.155ENSMPUG00000013213CPSF39967.155Mustela_putorius_furo
FBgn0261065Cpsf739867.353ENSMLUG00000010636CPSF39967.353Myotis_lucifugus
FBgn0261065Cpsf739867.158ENSNGAG00000019836Cpsf39967.158Nannospalax_galili
FBgn0261065Cpsf739967.841ENSNBRG00000004770cpsf39967.841Neolamprologus_brichardi
FBgn0261065Cpsf739064.058ENSNBRG00000010525CPSF39864.058Neolamprologus_brichardi
FBgn0261065Cpsf739867.158ENSNLEG00000013359CPSF39876.000Nomascus_leucogenys
FBgn0261065Cpsf738846.844ENSMEUG00000013117-8846.844Notamacropus_eugenii
FBgn0261065Cpsf739959.942ENSOPRG00000008902CPSF39959.942Ochotona_princeps
FBgn0261065Cpsf739867.158ENSODEG00000003129CPSF39967.158Octodon_degus
FBgn0261065Cpsf739967.548ENSONIG00000018812cpsf39967.548Oreochromis_niloticus
FBgn0261065Cpsf738164.413ENSOANG00000008577CPSF39964.413Ornithorhynchus_anatinus
FBgn0261065Cpsf739867.452ENSOCUG00000003728CPSF39967.452Oryctolagus_cuniculus
FBgn0261065Cpsf739966.520ENSORLG00000018854cpsf39966.520Oryzias_latipes
FBgn0261065Cpsf739966.373ENSORLG00020013331cpsf39966.373Oryzias_latipes_hni
FBgn0261065Cpsf739966.520ENSORLG00015011017cpsf39966.520Oryzias_latipes_hsok
FBgn0261065Cpsf739966.520ENSOMEG00000010647cpsf39566.520Oryzias_melastigma
FBgn0261065Cpsf739859.057ENSOGAG00000001680CPSF39959.057Otolemur_garnettii
FBgn0261065Cpsf739867.599ENSOARG00000015073CPSF39967.599Ovis_aries
FBgn0261065Cpsf739867.305ENSPPAG00000042457CPSF39876.000Pan_paniscus
FBgn0261065Cpsf739867.305ENSPPRG00000016790CPSF39967.452Panthera_pardus
FBgn0261065Cpsf739867.404ENSPTIG00000003920CPSF39967.552Panthera_tigris_altaica
FBgn0261065Cpsf739867.305ENSPTRG00000011638CPSF39876.000Pan_troglodytes
FBgn0261065Cpsf739867.158ENSPANG00000016798CPSF39477.917Papio_anubis
FBgn0261065Cpsf739966.138ENSPKIG00000023646cpsf310065.951Paramormyrops_kingsleyae
FBgn0261065Cpsf739866.421ENSPSIG00000016144CPSF39966.421Pelodiscus_sinensis
FBgn0261065Cpsf735855.721ENSPMGG00000015311CPSF39955.721Periophthalmus_magnuspinnatus
FBgn0261065Cpsf738167.928ENSPMGG00000006141-9667.928Periophthalmus_magnuspinnatus
FBgn0261065Cpsf739867.158ENSPEMG00000017668Cpsf39967.305Peromyscus_maniculatus_bairdii
FBgn0261065Cpsf737874.766ENSPMAG00000004841cpsf39775.379Petromyzon_marinus
FBgn0261065Cpsf739667.368ENSPCIG00000009823CPSF39868.196Phascolarctos_cinereus
FBgn0261065Cpsf739966.272ENSPFOG00000015922cpsf39966.272Poecilia_formosa
FBgn0261065Cpsf739965.747ENSPFOG00000010418-9965.747Poecilia_formosa
FBgn0261065Cpsf739966.272ENSPLAG00000000882cpsf39966.272Poecilia_latipinna
FBgn0261065Cpsf735857.389ENSPLAG00000021300-10057.389Poecilia_latipinna
FBgn0261065Cpsf739966.420ENSPMEG00000018309cpsf39966.420Poecilia_mexicana
FBgn0261065Cpsf739064.563ENSPREG00000014875cpsf39864.563Poecilia_reticulata
FBgn0261065Cpsf739964.483ENSPREG00000004482CPSF39964.483Poecilia_reticulata
FBgn0261065Cpsf739863.623ENSPPYG00000012666CPSF39963.623Pongo_abelii
FBgn0261065Cpsf737753.208ENSPCAG00000015042CPSF37954.264Procavia_capensis
FBgn0261065Cpsf738674.552ENSPCOG00000023016CPSF39674.552Propithecus_coquereli
FBgn0261065Cpsf739967.449ENSPVAG00000005324CPSF39967.449Pteropus_vampyrus
FBgn0261065Cpsf737968.762ENSPNYG00000021047CPSF39068.762Pundamilia_nyererei
FBgn0261065Cpsf739967.841ENSPNYG00000004405cpsf39967.841Pundamilia_nyererei
FBgn0261065Cpsf739965.889ENSPNAG00000023060cpsf39965.889Pygocentrus_nattereri
FBgn0261065Cpsf739867.305ENSRNOG00000052418Cpsf39967.305Rattus_norvegicus
FBgn0261065Cpsf739864.065ENSRBIG00000041615CPSF39964.651Rhinopithecus_bieti
FBgn0261065Cpsf739966.618ENSRROG00000033792CPSF39967.305Rhinopithecus_roxellana
FBgn0261065Cpsf738641.555YLR277CYSH18641.256Saccharomyces_cerevisiae
FBgn0261065Cpsf739665.564ENSSBOG00000027263CPSF39765.564Saimiri_boliviensis_boliviensis
FBgn0261065Cpsf739867.452ENSSHAG00000007024CPSF39967.452Sarcophilus_harrisii
FBgn0261065Cpsf739966.282ENSSFOG00015002108cpsf310065.625Scleropages_formosus
FBgn0261065Cpsf739567.226ENSSMAG00000020534CPSF39667.226Scophthalmus_maximus
FBgn0261065Cpsf739966.814ENSSDUG00000002828cpsf39666.814Seriola_dumerili
FBgn0261065Cpsf739866.814ENSSDUG00000018498CPSF39866.814Seriola_dumerili
FBgn0261065Cpsf739966.960ENSSLDG00000008469cpsf39768.621Seriola_lalandi_dorsalis
FBgn0261065Cpsf739866.814ENSSLDG00000005234CPSF39866.814Seriola_lalandi_dorsalis
FBgn0261065Cpsf738667.547ENSSARG00000005186CPSF38568.992Sorex_araneus
FBgn0261065Cpsf739666.069ENSSPUG00000015525CPSF39766.069Sphenodon_punctatus
FBgn0261065Cpsf739966.181ENSSPAG00000002906CPSF39966.181Stegastes_partitus
FBgn0261065Cpsf739966.569ENSSPAG00000018579cpsf39966.569Stegastes_partitus
FBgn0261065Cpsf739867.599ENSSSCG00000020799CPSF39967.599Sus_scrofa
FBgn0261065Cpsf739966.422ENSTGUG00000013016CPSF39966.422Taeniopygia_guttata
FBgn0261065Cpsf739966.174ENSTRUG00000007030cpsf39766.174Takifugu_rubripes
FBgn0261065Cpsf735853.202ENSTRUG00000013905CPSF310052.840Takifugu_rubripes
FBgn0261065Cpsf736876.243ENSTBEG00000002707CPSF37176.243Tupaia_belangeri
FBgn0261065Cpsf738661.017ENSTTRG00000000861CPSF38761.017Tursiops_truncatus
FBgn0261065Cpsf739568.798ENSUAMG00000007535CPSF39468.798Ursus_americanus
FBgn0261065Cpsf739366.977ENSUMAG00000003676CPSF39966.977Ursus_maritimus
FBgn0261065Cpsf739268.504ENSVPAG00000008041CPSF39968.504Vicugna_pacos
FBgn0261065Cpsf739867.599ENSVVUG00000002194CPSF39967.599Vulpes_vulpes
FBgn0261065Cpsf739966.035ENSXETG00000008263cpsf39966.035Xenopus_tropicalis
FBgn0261065Cpsf735455.228ENSXCOG00000000957-8755.228Xiphophorus_couchianus
FBgn0261065Cpsf739966.617ENSXCOG00000019695cpsf39966.617Xiphophorus_couchianus
FBgn0261065Cpsf739966.372ENSXMAG00000009784cpsf39966.372Xiphophorus_maculatus
FBgn0261065Cpsf739965.893ENSXMAG00000027291CPSF39965.893Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding21873635.IBAFunction
GO:0004521endoribonuclease activity21873635.IBAFunction
GO:0005515protein binding19450530.IPIFunction
GO:0005847mRNA cleavage and polyadenylation specificity factor complex21873635.IBAComponent
GO:0005847mRNA cleavage and polyadenylation specificity factor complex19450530.IDAComponent
GO:0005847mRNA cleavage and polyadenylation specificity factor complex10908584.ISSComponent
GO:0005847mRNA cleavage and polyadenylation specificity factor complex12068918.NASComponent
GO:0006378mRNA polyadenylation21873635.IBAProcess
GO:0006378mRNA polyadenylation19450530.IMPProcess
GO:0006378mRNA polyadenylation10908584.ISSProcess
GO:0006398mRNA 3'-end processing by stem-loop binding and cleavage21873635.IBAProcess
GO:0006398mRNA 3'-end processing by stem-loop binding and cleavage18042462.19450530.IMPProcess
GO:00084095'-3' exonuclease activity21873635.IBAFunction

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