EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Gene Ontology
Description
Ensembl ID
FBgn0261552 (Gene tree)
Gene ID
44258
Gene Symbol
ps
Alias
-
Full Name
pasilla
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
37561 bases
Position
chr3R:9417940-9455500
Accession
FBgn0261552
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0306418KH_1PF00013.292.3e-4113
FBpp0306418KH_1PF00013.292.3e-4123
FBpp0306418KH_1PF00013.292.3e-4133
FBpp0110330KH_1PF00013.292.6e-4113
FBpp0110330KH_1PF00013.292.6e-4123
FBpp0110330KH_1PF00013.292.6e-4133
FBpp0110331KH_1PF00013.292.9e-4113
FBpp0110331KH_1PF00013.292.9e-4123
FBpp0110331KH_1PF00013.292.9e-4133
FBpp0291834KH_1PF00013.292.9e-4113
FBpp0291834KH_1PF00013.292.9e-4123
FBpp0291834KH_1PF00013.292.9e-4133
FBpp0291835KH_1PF00013.292.9e-4113
FBpp0291835KH_1PF00013.292.9e-4123
FBpp0291835KH_1PF00013.292.9e-4133
FBpp0081517KH_1PF00013.293.2e-4113
FBpp0081517KH_1PF00013.293.2e-4123
FBpp0081517KH_1PF00013.293.2e-4133
FBpp0110326KH_1PF00013.293.3e-4113
FBpp0110326KH_1PF00013.293.3e-4123
FBpp0110326KH_1PF00013.293.3e-4133
FBpp0110327KH_1PF00013.293.3e-4113
FBpp0110327KH_1PF00013.293.3e-4123
FBpp0110327KH_1PF00013.293.3e-4133
FBpp0110328KH_1PF00013.293.3e-4113
FBpp0110328KH_1PF00013.293.3e-4123
FBpp0110328KH_1PF00013.293.3e-4133
FBpp0291832KH_1PF00013.293.3e-4113
FBpp0291832KH_1PF00013.293.3e-4123
FBpp0291832KH_1PF00013.293.3e-4133
FBpp0291833KH_1PF00013.293.3e-4113
FBpp0291833KH_1PF00013.293.3e-4123
FBpp0291833KH_1PF00013.293.3e-4133
FBpp0081516KH_1PF00013.293.6e-4113
FBpp0081516KH_1PF00013.293.6e-4123
FBpp0081516KH_1PF00013.293.6e-4133
FBpp0310688KH_1PF00013.293.8e-4113
FBpp0310688KH_1PF00013.293.8e-4123
FBpp0310688KH_1PF00013.293.8e-4133
FBpp0310689KH_1PF00013.294.2e-4113
FBpp0310689KH_1PF00013.294.2e-4123
FBpp0310689KH_1PF00013.294.2e-4133
FBpp0291831KH_1PF00013.299.2e-4113
FBpp0291831KH_1PF00013.299.2e-4123
FBpp0291831KH_1PF00013.299.2e-4133
FBpp0306419KH_1PF00013.291e-4013
FBpp0306419KH_1PF00013.291e-4023
FBpp0306419KH_1PF00013.291e-4033
FBpp0081515KH_1PF00013.291.5e-2912
FBpp0081515KH_1PF00013.291.5e-2922
FBpp0110329KH_1PF00013.292e-2912
FBpp0110329KH_1PF00013.292e-2922
FBpp0081515KH_2PF07650.172.2e-0911
FBpp0110329KH_2PF07650.173.2e-0911
FBpp0110330KH_2PF07650.173.5e-0811
FBpp0110326KH_2PF07650.173.6e-0811
FBpp0110327KH_2PF07650.173.6e-0811
FBpp0110328KH_2PF07650.173.6e-0811
FBpp0291832KH_2PF07650.173.6e-0811
FBpp0291833KH_2PF07650.173.6e-0811
FBpp0081516KH_2PF07650.173.8e-0811
FBpp0310689KH_2PF07650.176.2e-0811
FBpp0306419KH_2PF07650.177.4e-0811
FBpp0310688KH_2PF07650.171.4e-0711
FBpp0306418KH_2PF07650.172.3e-0711
FBpp0110331KH_2PF07650.172.4e-0711
FBpp0291834KH_2PF07650.172.4e-0711
FBpp0291835KH_2PF07650.172.4e-0711
FBpp0081517KH_2PF07650.172.5e-0711
FBpp0291831KH_2PF07650.173.2e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0082039-2619-FBpp0081517561 (aa)-Q8IGS7
FBtr0082038-2685-FBpp0081516583 (aa)-Q8INP0
FBtr0111030-4635-FBpp0110329519 (aa)-Q0KI94
FBtr0082037-4508-FBpp0081515475 (aa)-Q9GNC8
FBtr0344284-2889-FBpp0310689616 (aa)-A0A0B4LI06
FBtr0334303-2492-FBpp0306418517 (aa)-A0A0B4KFY5
FBtr0334304-3624-FBpp0306419780 (aa)-A0A0B4KGY6
FBtr0344283-10080-FBpp0310688594 (aa)-A0A0B4LGY5
FBtr0111031-2558-FBpp0110330539 (aa)-Q8T4D1
FBtr0111027-3538-FBpp0110326572 (aa)-Q9GQN4
FBtr0111032-10086-FBpp0110331550 (aa)-A0A023UKB8
FBtr0302695-3472-FBpp0291835550 (aa)-Q0KI96
FBtr0302693-3514-FBpp0291833572 (aa)-Q9GQN4
FBtr0302692-10124-FBpp0291832572 (aa)-Q9GQN4
FBtr0302691-3964-FBpp0291831758 (aa)-A0A0B4JCX5
FBtr0302694-3238-FBpp0291834550 (aa)-Q0KI96
FBtr0111028-3301-FBpp0110327572 (aa)-Q9GQN4
FBtr0111029-3736-FBpp0110328572 (aa)-Q9GQN4
Gene Model
Click here to download FBgn0261552's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0261552's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0261552ps5731.897FBgn0262737mub8832.941
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000381regulation of alternative mRNA splicing, via spliceosome15492211.HMPProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome15492211.IMPProcess
GO:0005634nucleus11784037.IDAComponent
GO:0005829cytosol25294944.HDAComponent
GO:0033120positive regulation of RNA splicing28525754.IDAProcess
GO:0097157pre-mRNA intronic binding28525754.IDAFunction

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