EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0261789 (Gene tree)
Gene ID
40781
Gene Symbol
SmD2
Alias
-
Full Name
Small ribonucleoprotein particle protein SmD2
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
putative
Strand
Minus strand
Length
912 bases
Position
chr3R:6345000-6345911
Accession
FBgn0261789
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0081234LSMPF01423.223.6e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0081737-778-FBpp0081234119 (aa)-Q9VI10
Gene Model
Click here to download FBgn0261789's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0261789's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0261789SmD26937.805FBgn0051184LSm37735.366
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0261789SmD29888.034ENSG00000125743SNRPD210088.182Homo_sapiens
FBgn0261789SmD29688.596ENSAPOG00000012310snrpd29788.596Acanthochromis_polyacanthus
FBgn0261789SmD29888.034ENSAMEG00000000818-9888.034Ailuropoda_melanoleuca
FBgn0261789SmD29088.785ENSACIG00000022689snrpd29988.785Amphilophus_citrinellus
FBgn0261789SmD29688.596ENSAOCG00000024413snrpd29788.596Amphiprion_ocellaris
FBgn0261789SmD29688.596ENSAPEG00000021711snrpd29788.596Amphiprion_percula
FBgn0261789SmD29688.596ENSATEG00000000868snrpd29588.596Anabas_testudineus
FBgn0261789SmD29888.034ENSACAG00000016779-9788.034Anolis_carolinensis
FBgn0261789SmD29685.965ENSANAG00000003063-9785.965Aotus_nancymaae
FBgn0261789SmD29886.325ENSANAG00000017079-9786.325Aotus_nancymaae
FBgn0261789SmD29880.342ENSANAG00000018193-9781.197Aotus_nancymaae
FBgn0261789SmD29686.842ENSANAG00000001612-9686.842Aotus_nancymaae
FBgn0261789SmD29688.596ENSACLG00000001746snrpd29788.596Astatotilapia_calliptera
FBgn0261789SmD29688.596ENSAMXG00000033526snrpd29788.596Astyanax_mexicanus
FBgn0261789SmD29888.034ENSBTAG00000012177SNRPD29788.034Bos_taurus
FBgn0261789SmD29782.609WBGene00004917snr-49782.609Caenorhabditis_elegans
FBgn0261789SmD29885.470ENSCJAG00000047147-9785.470Callithrix_jacchus
FBgn0261789SmD29886.325ENSCJAG00000041687-9786.325Callithrix_jacchus
FBgn0261789SmD29888.034ENSCJAG00000012413-9788.034Callithrix_jacchus
FBgn0261789SmD29887.179ENSCJAG00000019291-9787.179Callithrix_jacchus
FBgn0261789SmD29886.325ENSCJAG00000047157-9786.325Callithrix_jacchus
FBgn0261789SmD29886.325ENSCJAG00000044646-9786.325Callithrix_jacchus
FBgn0261789SmD29888.034ENSCJAG00000044723-9788.034Callithrix_jacchus
FBgn0261789SmD29888.034ENSCAFG00000004403SNRPD29788.034Canis_familiaris
FBgn0261789SmD29779.130ENSCAFG00000000634-9778.632Canis_familiaris
FBgn0261789SmD29779.130ENSCAFG00020002921-9778.632Canis_lupus_dingo
FBgn0261789SmD29488.393ENSCAFG00020003532-9888.393Canis_lupus_dingo
FBgn0261789SmD29888.034ENSCHIG00000015755-9788.034Capra_hircus
FBgn0261789SmD29888.034ENSTSYG00000011207-9788.034Carlito_syrichta
FBgn0261789SmD28280.612ENSTSYG00000031156-8478.571Carlito_syrichta
FBgn0261789SmD29888.034ENSCAPG00000011695-9788.034Cavia_aperea
FBgn0261789SmD29678.070ENSCAPG00000006559-9481.081Cavia_aperea
FBgn0261789SmD29877.778ENSCPOG00000025735-9777.778Cavia_porcellus
FBgn0261789SmD29888.034ENSCPOG00000035154-9788.034Cavia_porcellus
FBgn0261789SmD29887.179ENSCCAG00000011183-9787.179Cebus_capucinus
FBgn0261789SmD29885.470ENSCCAG00000012011-9785.470Cebus_capucinus
FBgn0261789SmD29868.376ENSCCAG00000020956-9768.376Cebus_capucinus
FBgn0261789SmD29670.175ENSCCAG00000030191-9670.175Cebus_capucinus
FBgn0261789SmD29888.034ENSCCAG00000035396SNRPD29788.034Cebus_capucinus
FBgn0261789SmD29887.179ENSCATG00000005272-9787.179Cercocebus_atys
FBgn0261789SmD28489.000ENSCATG00000040410-9492.063Cercocebus_atys
FBgn0261789SmD29886.325ENSCATG00000031591-9786.325Cercocebus_atys
FBgn0261789SmD29277.982ENSCLAG00000017381-9877.982Chinchilla_lanigera
FBgn0261789SmD29870.940ENSCLAG00000001183-9770.940Chinchilla_lanigera
FBgn0261789SmD29888.034ENSCLAG00000000931-9788.034Chinchilla_lanigera
FBgn0261789SmD29888.034ENSCSAG00000003157SNRPD29788.034Chlorocebus_sabaeus
FBgn0261789SmD29888.034ENSCPBG00000007259SNRPD29788.034Chrysemys_picta_bellii
FBgn0261789SmD29483.929ENSCING00000020031-9583.929Ciona_intestinalis
FBgn0261789SmD29084.112ENSCSAVG00000003527-8982.727Ciona_savignyi
FBgn0261789SmD28273.469ENSCANG00000035956-8674.194Colobus_angolensis_palliatus
FBgn0261789SmD29887.179ENSCANG00000038535-9787.179Colobus_angolensis_palliatus
FBgn0261789SmD29778.261ENSCGRG00001003078-10077.500Cricetulus_griseus_chok1gshd
FBgn0261789SmD29882.906ENSCGRG00000011635-9882.906Cricetulus_griseus_crigri
FBgn0261789SmD29688.596ENSCSEG00000002230snrpd29788.596Cynoglossus_semilaevis
FBgn0261789SmD29688.596ENSCVAG00000010204SNRPD29488.596Cyprinodon_variegatus
FBgn0261789SmD29688.596ENSCVAG00000014834snrpd29788.596Cyprinodon_variegatus
FBgn0261789SmD29688.596ENSDARG00000040440snrpd29788.596Danio_rerio
FBgn0261789SmD29888.034ENSDNOG00000002365-9188.034Dasypus_novemcinctus
FBgn0261789SmD29888.034ENSDORG00000001729Snrpd29888.034Dipodomys_ordii
FBgn0261789SmD29870.940ENSETEG00000002893-9769.231Echinops_telfairi
FBgn0261789SmD29489.286ENSEBUG00000002144snrpd29390.090Eptatretus_burgeri
FBgn0261789SmD29469.027ENSEASG00005016910-8468.750Equus_asinus_asinus
FBgn0261789SmD29888.034ENSEASG00005014210-9788.034Equus_asinus_asinus
FBgn0261789SmD29488.393ENSECAG00000007824SNRPD29688.393Equus_caballus
FBgn0261789SmD29787.069ENSELUG00000020393snrpd26587.069Esox_lucius
FBgn0261789SmD29888.034ENSFCAG00000022530-9788.034Felis_catus
FBgn0261789SmD28780.769ENSFCAG00000024879-6781.553Felis_catus
FBgn0261789SmD29888.034ENSFDAG00000015792SNRPD29788.034Fukomys_damarensis
FBgn0261789SmD29688.596ENSFHEG00000015591snrpd29788.596Fundulus_heteroclitus
FBgn0261789SmD29688.596ENSGMOG00000013857snrpd29788.596Gadus_morhua
FBgn0261789SmD29688.596ENSGAFG00000001246snrpd29788.596Gambusia_affinis
FBgn0261789SmD29687.719ENSGACG00000006697snrpd29787.719Gasterosteus_aculeatus
FBgn0261789SmD26790.000ENSGAGG00000017944SNRPD25389.610Gopherus_agassizii
FBgn0261789SmD29888.034ENSGGOG00000002350SNRPD29788.034Gorilla_gorilla
FBgn0261789SmD29688.596ENSHBUG00000004073snrpd29788.596Haplochromis_burtoni
FBgn0261789SmD29888.034ENSHGLG00000015364SNRPD29788.034Heterocephalus_glaber_female
FBgn0261789SmD29871.795ENSHGLG00000017154-9771.795Heterocephalus_glaber_female
FBgn0261789SmD29888.034ENSHGLG00100015694SNRPD29788.034Heterocephalus_glaber_male
FBgn0261789SmD29784.348ENSHGLG00100020606-6383.761Heterocephalus_glaber_male
FBgn0261789SmD29687.719ENSHCOG00000010973snrpd29787.719Hippocampus_comes
FBgn0261789SmD29888.034ENSIPUG00000001053snrpd29788.034Ictalurus_punctatus
FBgn0261789SmD29888.034ENSSTOG00000024377SNRPD29788.034Ictidomys_tridecemlineatus
FBgn0261789SmD29888.034ENSJJAG00000002622Snrpd29788.034Jaculus_jaculus
FBgn0261789SmD29688.596ENSKMAG00000001539snrpd29788.596Kryptolebias_marmoratus
FBgn0261789SmD29688.596ENSLBEG00000019436snrpd29788.596Labrus_bergylta
FBgn0261789SmD29088.785ENSLACG00000004720SNRPD29988.785Latimeria_chalumnae
FBgn0261789SmD29688.596ENSLOCG00000014824snrpd29788.596Lepisosteus_oculatus
FBgn0261789SmD29888.034ENSLAFG00000004205-9788.034Loxodonta_africana
FBgn0261789SmD29887.179ENSMFAG00000020148-9787.179Macaca_fascicularis
FBgn0261789SmD29885.470ENSMFAG00000009957-9785.470Macaca_fascicularis
FBgn0261789SmD29888.034ENSMFAG00000045767-9788.034Macaca_fascicularis
FBgn0261789SmD29885.470ENSMMUG00000032525-9785.470Macaca_mulatta
FBgn0261789SmD29481.416ENSMMUG00000030518-9681.416Macaca_mulatta
FBgn0261789SmD29887.179ENSMMUG00000032370-9787.179Macaca_mulatta
FBgn0261789SmD29884.615ENSMNEG00000010649-9784.615Macaca_nemestrina
FBgn0261789SmD29886.325ENSMNEG00000021599-9786.325Macaca_nemestrina
FBgn0261789SmD29178.704ENSMNEG00000039787-8181.443Macaca_nemestrina
FBgn0261789SmD29885.470ENSMLEG00000008325-9785.470Mandrillus_leucophaeus
FBgn0261789SmD29688.596ENSMAMG00000013925snrpd29788.596Mastacembelus_armatus
FBgn0261789SmD29688.596ENSMZEG00005013054snrpd29788.596Maylandia_zebra
FBgn0261789SmD29888.034ENSMAUG00000018849Snrpd29788.034Mesocricetus_auratus
FBgn0261789SmD29888.034ENSMICG00000031545SNRPD29788.034Microcebus_murinus
FBgn0261789SmD29483.036ENSMOCG00000017135-9484.685Microtus_ochrogaster
FBgn0261789SmD29888.034ENSMOCG00000017080Snrpd29788.034Microtus_ochrogaster
FBgn0261789SmD29688.596ENSMMOG00000004936snrpd29788.596Mola_mola
FBgn0261789SmD29888.034ENSMODG00000021539-9788.034Monodelphis_domestica
FBgn0261789SmD29688.596ENSMALG00000010608snrpd29788.596Monopterus_albus
FBgn0261789SmD29888.034MGP_CAROLIEiJ_G0029275-9788.034Mus_caroli
FBgn0261789SmD29883.761MGP_CAROLIEiJ_G0018529-9783.761Mus_caroli
FBgn0261789SmD29888.034ENSMUSG00000040824Snrpd29788.034Mus_musculus
FBgn0261789SmD29888.034MGP_PahariEiJ_G0021135-9788.034Mus_pahari
FBgn0261789SmD29879.487MGP_SPRETEiJ_G0019409-9780.342Mus_spretus
FBgn0261789SmD29888.034MGP_SPRETEiJ_G0030359Snrpd29788.034Mus_spretus
FBgn0261789SmD29787.069ENSMPUG00000005733-9687.069Mustela_putorius_furo
FBgn0261789SmD29783.478ENSMLUG00000026353-9583.478Myotis_lucifugus
FBgn0261789SmD29871.795ENSMLUG00000026025-9771.795Myotis_lucifugus
FBgn0261789SmD29882.906ENSMLUG00000025417-9782.906Myotis_lucifugus
FBgn0261789SmD29779.130ENSMLUG00000030461-9879.130Myotis_lucifugus
FBgn0261789SmD29888.034ENSMLUG00000001306-9888.034Myotis_lucifugus
FBgn0261789SmD29888.034ENSNGAG00000010411-9788.034Nannospalax_galili
FBgn0261789SmD28678.431ENSNGAG00000013160-6676.471Nannospalax_galili
FBgn0261789SmD29688.596ENSNBRG00000000805snrpd29788.596Neolamprologus_brichardi
FBgn0261789SmD29888.034ENSNLEG00000002274SNRPD210088.182Nomascus_leucogenys
FBgn0261789SmD29888.034ENSMEUG00000012031-9888.034Notamacropus_eugenii
FBgn0261789SmD29888.034ENSOPRG00000008321-9788.034Ochotona_princeps
FBgn0261789SmD29887.179ENSODEG00000012799-9387.179Octodon_degus
FBgn0261789SmD29888.034ENSODEG00000008857-9788.034Octodon_degus
FBgn0261789SmD29885.470ENSODEG00000020094-9785.470Octodon_degus
FBgn0261789SmD29888.034ENSODEG00000020096-9788.034Octodon_degus
FBgn0261789SmD25088.136ENSODEG00000008077-7988.136Octodon_degus
FBgn0261789SmD29886.325ENSODEG00000019447-9786.325Octodon_degus
FBgn0261789SmD29888.034ENSODEG00000020139-9788.034Octodon_degus
FBgn0261789SmD26378.667ENSODEG00000011751-5990.476Octodon_degus
FBgn0261789SmD29688.596ENSONIG00000005406snrpd29788.596Oreochromis_niloticus
FBgn0261789SmD29888.034ENSOANG00000000813-9388.034Ornithorhynchus_anatinus
FBgn0261789SmD29888.034ENSOCUG00000022402SNRPD29788.034Oryctolagus_cuniculus
FBgn0261789SmD29687.719ENSORLG00000026725snrpd29787.719Oryzias_latipes
FBgn0261789SmD29687.719ENSORLG00020011312snrpd29787.719Oryzias_latipes_hni
FBgn0261789SmD29687.719ENSORLG00015019579snrpd29787.719Oryzias_latipes_hsok
FBgn0261789SmD29687.719ENSOMEG00000012661snrpd29987.850Oryzias_melastigma
FBgn0261789SmD29888.034ENSOGAG00000030128-9888.034Otolemur_garnettii
FBgn0261789SmD29888.034ENSOARG00000010203-9788.034Ovis_aries
FBgn0261789SmD29885.470ENSOARG00000016742-9785.470Ovis_aries
FBgn0261789SmD29888.034ENSPPAG00000038031SNRPD29788.034Pan_paniscus
FBgn0261789SmD29888.034ENSPPRG00000012309SNRPD29788.034Panthera_pardus
FBgn0261789SmD28779.808ENSPPRG00000000040-8476.923Panthera_pardus
FBgn0261789SmD29288.182ENSPTIG00000006666-10088.182Panthera_tigris_altaica
FBgn0261789SmD27958.511ENSPTIG00000000935-6680.952Panthera_tigris_altaica
FBgn0261789SmD29888.034ENSPTRG00000011162SNRPD29788.034Pan_troglodytes
FBgn0261789SmD29687.719ENSPANG00000017743-9787.719Papio_anubis
FBgn0261789SmD29888.034ENSPANG00000008802-9788.034Papio_anubis
FBgn0261789SmD29687.719ENSPKIG00000001110snrpd29787.719Paramormyrops_kingsleyae
FBgn0261789SmD29288.182ENSPSIG00000015823-10088.182Pelodiscus_sinensis
FBgn0261789SmD29687.719ENSPMGG00000016148snrpd29787.719Periophthalmus_magnuspinnatus
FBgn0261789SmD29882.906ENSPEMG00000009398-9782.906Peromyscus_maniculatus_bairdii
FBgn0261789SmD29888.034ENSPEMG00000004117-9788.034Peromyscus_maniculatus_bairdii
FBgn0261789SmD29888.034ENSPCIG00000022986SNRPD29788.034Phascolarctos_cinereus
FBgn0261789SmD29688.596ENSPFOG00000016809snrpd29788.596Poecilia_formosa
FBgn0261789SmD29688.596ENSPLAG00000010725snrpd29788.596Poecilia_latipinna
FBgn0261789SmD29688.596ENSPMEG00000000107snrpd29788.596Poecilia_mexicana
FBgn0261789SmD29389.189ENSPREG00000004078snrpd29789.189Poecilia_reticulata
FBgn0261789SmD29888.034ENSPPYG00000010129SNRPD29788.034Pongo_abelii
FBgn0261789SmD29888.034ENSPCAG00000016818SNRPD29788.034Procavia_capensis
FBgn0261789SmD29888.034ENSPCOG00000028811-9788.034Propithecus_coquereli
FBgn0261789SmD29888.034ENSPCOG00000001429-9788.034Propithecus_coquereli
FBgn0261789SmD29888.034ENSPVAG00000001345-9888.034Pteropus_vampyrus
FBgn0261789SmD29688.596ENSPNYG00000011826snrpd29788.596Pundamilia_nyererei
FBgn0261789SmD29688.596ENSPNAG00000025554snrpd29788.596Pygocentrus_nattereri
FBgn0261789SmD29885.470ENSRNOG00000048758Snrpd2l9785.470Rattus_norvegicus
FBgn0261789SmD29888.034ENSRNOG00000015844Snrpd29788.034Rattus_norvegicus
FBgn0261789SmD29876.923ENSRBIG00000032406-9776.923Rhinopithecus_bieti
FBgn0261789SmD29888.034ENSRBIG00000040969SNRPD29788.034Rhinopithecus_bieti
FBgn0261789SmD29773.043ENSRBIG00000032742-9673.913Rhinopithecus_bieti
FBgn0261789SmD29888.034ENSRROG00000034764SNRPD29788.034Rhinopithecus_roxellana
FBgn0261789SmD29876.068ENSRROG00000030974-9776.068Rhinopithecus_roxellana
FBgn0261789SmD29255.963YLR275WSMD29355.046Saccharomyces_cerevisiae
FBgn0261789SmD29887.179ENSSBOG00000017764-9787.179Saimiri_boliviensis_boliviensis
FBgn0261789SmD29888.034ENSSBOG00000009827-9788.034Saimiri_boliviensis_boliviensis
FBgn0261789SmD29888.034ENSSBOG00000035164-9788.034Saimiri_boliviensis_boliviensis
FBgn0261789SmD29685.965ENSSBOG00000019992-7985.965Saimiri_boliviensis_boliviensis
FBgn0261789SmD29887.179ENSSHAG00000003772-9787.179Sarcophilus_harrisii
FBgn0261789SmD29688.596ENSSFOG00015022535snrpd29988.785Scleropages_formosus
FBgn0261789SmD29888.034ENSSFOG00015016069-9788.034Scleropages_formosus
FBgn0261789SmD29687.719ENSSMAG00000003422snrpd29787.719Scophthalmus_maximus
FBgn0261789SmD29688.596ENSSDUG00000005519snrpd29788.596Seriola_dumerili
FBgn0261789SmD29688.596ENSSLDG00000009397snrpd29788.596Seriola_lalandi_dorsalis
FBgn0261789SmD29888.034ENSSARG00000009167-9888.034Sorex_araneus
FBgn0261789SmD29688.596ENSSPAG00000015767snrpd29788.596Stegastes_partitus
FBgn0261789SmD29888.034ENSSSCG00000033500SNRPD29788.034Sus_scrofa
FBgn0261789SmD26767.857ENSSSCG00000040417-7269.444Sus_scrofa
FBgn0261789SmD29687.719ENSTRUG00000023014snrpd29787.719Takifugu_rubripes
FBgn0261789SmD28289.691ENSTNIG00000011736snrpd28989.691Tetraodon_nigroviridis
FBgn0261789SmD29888.034ENSTBEG00000001752SNRPD29788.034Tupaia_belangeri
FBgn0261789SmD29888.034ENSTTRG00000014299-9788.034Tursiops_truncatus
FBgn0261789SmD27570.787ENSUAMG00000022454-6371.429Ursus_americanus
FBgn0261789SmD29888.034ENSUAMG00000023173SNRPD29788.034Ursus_americanus
FBgn0261789SmD29888.034ENSUMAG00000023685-9788.034Ursus_maritimus
FBgn0261789SmD27570.787ENSUMAG00000001547-6371.429Ursus_maritimus
FBgn0261789SmD29488.393ENSVVUG00000003181-9888.393Vulpes_vulpes
FBgn0261789SmD29880.342ENSVVUG00000016748-9780.342Vulpes_vulpes
FBgn0261789SmD29888.034ENSXETG00000002173snrpd29888.034Xenopus_tropicalis
FBgn0261789SmD29688.596ENSXCOG00000001082snrpd29088.596Xiphophorus_couchianus
FBgn0261789SmD29688.596ENSXMAG00000001018snrpd29788.596Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000278mitotic cell cycle18463163.HMPProcess
GO:0000387spliceosomal snRNP assembly21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome18981222.ICProcess
GO:0000398mRNA splicing, via spliceosome10908584.ISSProcess
GO:0003723RNA binding-ISSFunction
GO:0005681spliceosomal complex10908584.ISSComponent
GO:0005682U5 snRNP21873635.IBAComponent
GO:0005685U1 snRNP21873635.IBAComponent
GO:0005686U2 snRNP21873635.IBAComponent
GO:0030532small nuclear ribonucleoprotein complex10908584.ISSComponent
GO:0046540U4/U6 x U5 tri-snRNP complex21873635.IBAComponent
GO:0071011precatalytic spliceosome18981222.HDAComponent
GO:0071013catalytic step 2 spliceosome18981222.HDAComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent

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