EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0261792 (Gene tree)
Gene ID: 42274
Gene Symbol: snRNP-U1-C
Alias: -
Full Name: small ribonucleoprotein particle U1 subunit C
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 687 bases
Position: chr3R:18982964-18983650
Accession: FBgn0261792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083134	zf-U1	PF06220.12	6.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083720	-	687	-	FBpp0083134	145 (aa)	-	Q9VE17

Gene Model

Click here to download FBgn0261792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0261792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0261792	snRNP-U1-C	73	46.296	ENSMOCG00000022679	-	79	42.754	Microtus_ochrogaster

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	19218244.	IMP	Process
GO:0000387	spliceosomal snRNP assembly	-	IEA	Process
GO:0000395	mRNA 5'-splice site recognition	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	10908584.	ISS	Process
GO:0005634	nucleus	15492211.	IC	Component
GO:0005634	nucleus	1834995.	IDA	Component
GO:0005685	U1 snRNP	21873635.	IBA	Component
GO:0005685	U1 snRNP	10908584.	ISS	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0030532	small nuclear ribonucleoprotein complex	1834995.	IDA	Component
GO:0030627	pre-mRNA 5'-splice site binding	21873635.	IBA	Function