EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0261938 (Gene tree)
Gene ID: 33285
Gene Symbol: mtRNApol
Alias: -
Full Name: mitochondrial RNA polymerase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 5120 bases
Position: chr2L:1103254-1108373
Accession: FBgn0261938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077654	RNA_pol	PF00940.19	1.1e-159	1	1
FBpp0304562	RNA_pol	PF00940.19	1.1e-159	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0077989	-	4489	-	FBpp0077654	1369 (aa)	-	Q9VPW4
FBtr0332273	-	4718	-	FBpp0304562	1369 (aa)	-	Q8MRK5

Gene Model

Click here to download FBgn0261938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0261938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0261938	mtRNApol	77	42.563	ENSG00000099821	POLRMT	67	68.235	Homo_sapiens
FBgn0261938	mtRNApol	77	42.978	ENSAPOG00000003942	polrmt	76	42.978	Acanthochromis_polyacanthus
FBgn0261938	mtRNApol	78	41.858	ENSAMEG00000002745	POLRMT	83	41.835	Ailuropoda_melanoleuca
FBgn0261938	mtRNApol	80	42.157	ENSACIG00000016078	polrmt	93	42.157	Amphilophus_citrinellus
FBgn0261938	mtRNApol	85	40.235	ENSAOCG00000020208	polrmt	89	40.235	Amphiprion_ocellaris
FBgn0261938	mtRNApol	77	43.380	ENSAPEG00000007949	polrmt	78	43.032	Amphiprion_percula
FBgn0261938	mtRNApol	78	43.058	ENSATEG00000024025	polrmt	81	42.373	Anabas_testudineus
FBgn0261938	mtRNApol	64	46.804	ENSAPLG00000003051	POLRMT	97	42.648	Anas_platyrhynchos
FBgn0261938	mtRNApol	77	42.455	ENSANAG00000032916	POLRMT	82	42.402	Aotus_nancymaae
FBgn0261938	mtRNApol	78	43.178	ENSACLG00000003766	polrmt	78	43.178	Astatotilapia_calliptera
FBgn0261938	mtRNApol	70	55.145	ENSAMXG00000018258	polrmt	77	55.145	Astyanax_mexicanus
FBgn0261938	mtRNApol	78	41.636	ENSBTAG00000015051	POLRMT	83	41.376	Bos_taurus
FBgn0261938	mtRNApol	80	41.230	ENSCJAG00000012913	POLRMT	84	41.230	Callithrix_jacchus
FBgn0261938	mtRNApol	78	41.357	ENSCAFG00000019711	POLRMT	84	41.351	Canis_familiaris
FBgn0261938	mtRNApol	78	41.357	ENSCAFG00020016843	POLRMT	86	41.351	Canis_lupus_dingo
FBgn0261938	mtRNApol	78	42.247	ENSCHIG00000013267	POLRMT	84	41.983	Capra_hircus
FBgn0261938	mtRNApol	77	51.824	ENSCAPG00000016900	POLRMT	89	51.290	Cavia_aperea
FBgn0261938	mtRNApol	79	40.459	ENSCPOG00000023061	POLRMT	86	40.605	Cavia_porcellus
FBgn0261938	mtRNApol	77	42.105	ENSCCAG00000025014	POLRMT	82	42.036	Cebus_capucinus
FBgn0261938	mtRNApol	77	42.498	ENSCATG00000040393	POLRMT	82	42.311	Cercocebus_atys
FBgn0261938	mtRNApol	77	41.188	ENSCLAG00000007473	POLRMT	72	41.023	Chinchilla_lanigera
FBgn0261938	mtRNApol	77	41.171	ENSCSAG00000012942	POLRMT	82	40.985	Chlorocebus_sabaeus
FBgn0261938	mtRNApol	78	44.164	ENSCPBG00000009869	POLRMT	89	43.966	Chrysemys_picta_bellii
FBgn0261938	mtRNApol	60	42.381	ENSCSAVG00000000440	-	99	41.897	Ciona_savignyi
FBgn0261938	mtRNApol	77	42.071	ENSCANG00000038011	POLRMT	82	41.884	Colobus_angolensis_palliatus
FBgn0261938	mtRNApol	70	55.288	ENSCGRG00001021311	Polrmt	82	55.128	Cricetulus_griseus_chok1gshd
FBgn0261938	mtRNApol	77	42.453	ENSCGRG00000011134	Polrmt	84	42.358	Cricetulus_griseus_crigri
FBgn0261938	mtRNApol	77	42.910	ENSCSEG00000002734	polrmt	78	42.910	Cynoglossus_semilaevis
FBgn0261938	mtRNApol	77	43.446	ENSCVAG00000005949	polrmt	84	43.536	Cyprinodon_variegatus
FBgn0261938	mtRNApol	77	43.744	ENSDARG00000101220	polrmt	80	43.744	Danio_rerio
FBgn0261938	mtRNApol	75	55.519	ENSDORG00000014125	Polrmt	83	55.319	Dipodomys_ordii
FBgn0261938	mtRNApol	57	60.000	ENSETEG00000003476	POLRMT	82	40.131	Echinops_telfairi
FBgn0261938	mtRNApol	70	43.750	ENSEBUG00000013453	-	99	43.648	Eptatretus_burgeri
FBgn0261938	mtRNApol	78	42.120	ENSEASG00005021493	POLRMT	83	42.475	Equus_asinus_asinus
FBgn0261938	mtRNApol	78	42.290	ENSECAG00000032711	POLRMT	83	42.672	Equus_caballus
FBgn0261938	mtRNApol	78	43.697	ENSELUG00000019319	polrmt	76	43.697	Esox_lucius
FBgn0261938	mtRNApol	77	41.839	ENSFCAG00000018808	POLRMT	82	41.830	Felis_catus
FBgn0261938	mtRNApol	62	42.093	ENSFALG00000013910	POLRMT	78	41.860	Ficedula_albicollis
FBgn0261938	mtRNApol	77	40.437	ENSFDAG00000020312	POLRMT	81	40.511	Fukomys_damarensis
FBgn0261938	mtRNApol	77	42.563	ENSFHEG00000021239	polrmt	86	42.235	Fundulus_heteroclitus
FBgn0261938	mtRNApol	77	41.659	ENSGMOG00000011829	polrmt	86	41.543	Gadus_morhua
FBgn0261938	mtRNApol	75	43.427	ENSGALG00000001377	POLRMT	79	43.525	Gallus_gallus
FBgn0261938	mtRNApol	78	43.937	ENSGAFG00000003953	polrmt	78	43.937	Gambusia_affinis
FBgn0261938	mtRNApol	78	41.698	ENSGACG00000012957	polrmt	86	41.698	Gasterosteus_aculeatus
FBgn0261938	mtRNApol	78	43.446	ENSGAGG00000005522	POLRMT	89	43.446	Gopherus_agassizii
FBgn0261938	mtRNApol	64	62.145	ENSGGOG00000023264	-	78	62.145	Gorilla_gorilla
FBgn0261938	mtRNApol	78	43.364	ENSHBUG00000010005	polrmt	77	43.364	Haplochromis_burtoni
FBgn0261938	mtRNApol	74	42.131	ENSHGLG00000019286	POLRMT	77	40.782	Heterocephalus_glaber_female
FBgn0261938	mtRNApol	74	41.056	ENSHGLG00100005762	POLRMT	83	39.758	Heterocephalus_glaber_male
FBgn0261938	mtRNApol	80	42.214	ENSHCOG00000001565	polrmt	85	42.214	Hippocampus_comes
FBgn0261938	mtRNApol	77	43.944	ENSIPUG00000000789	polrmt	84	43.797	Ictalurus_punctatus
FBgn0261938	mtRNApol	67	57.043	ENSSTOG00000003431	POLRMT	79	57.043	Ictidomys_tridecemlineatus
FBgn0261938	mtRNApol	71	52.167	ENSJJAG00000012916	Polrmt	82	52.167	Jaculus_jaculus
FBgn0261938	mtRNApol	77	43.592	ENSKMAG00000004426	polrmt	80	43.592	Kryptolebias_marmoratus
FBgn0261938	mtRNApol	78	43.070	ENSLBEG00000016529	polrmt	76	43.070	Labrus_bergylta
FBgn0261938	mtRNApol	77	43.515	ENSLACG00000011518	POLRMT	84	43.515	Latimeria_chalumnae
FBgn0261938	mtRNApol	77	39.511	ENSLOCG00000005222	polrmt	77	39.662	Lepisosteus_oculatus
FBgn0261938	mtRNApol	80	41.342	ENSLAFG00000001860	POLRMT	86	41.704	Loxodonta_africana
FBgn0261938	mtRNApol	77	42.218	ENSMFAG00000031466	POLRMT	82	42.032	Macaca_fascicularis
FBgn0261938	mtRNApol	74	43.272	ENSMNEG00000039129	POLRMT	84	41.395	Macaca_nemestrina
FBgn0261938	mtRNApol	66	59.053	ENSMLEG00000037404	POLRMT	80	59.053	Mandrillus_leucophaeus
FBgn0261938	mtRNApol	78	43.231	ENSMAMG00000019284	polrmt	77	43.231	Mastacembelus_armatus
FBgn0261938	mtRNApol	78	43.178	ENSMZEG00005009932	polrmt	78	43.178	Maylandia_zebra
FBgn0261938	mtRNApol	75	42.746	ENSMGAG00000003243	POLRMT	85	42.843	Meleagris_gallopavo
FBgn0261938	mtRNApol	70	55.644	ENSMAUG00000019392	Polrmt	80	55.962	Mesocricetus_auratus
FBgn0261938	mtRNApol	77	41.884	ENSMICG00000016701	POLRMT	82	41.706	Microcebus_murinus
FBgn0261938	mtRNApol	74	42.774	ENSMOCG00000008868	Polrmt	81	42.580	Microtus_ochrogaster
FBgn0261938	mtRNApol	76	39.496	ENSMMOG00000000705	polrmt	82	39.589	Mola_mola
FBgn0261938	mtRNApol	81	40.036	ENSMODG00000006478	POLRMT	86	39.394	Monodelphis_domestica
FBgn0261938	mtRNApol	78	42.002	ENSMALG00000021224	polrmt	77	41.972	Monopterus_albus
FBgn0261938	mtRNApol	72	56.140	MGP_CAROLIEiJ_G0015538	Polrmt	100	53.563	Mus_caroli
FBgn0261938	mtRNApol	72	55.821	ENSMUSG00000020329	Polrmt	99	53.899	Mus_musculus
FBgn0261938	mtRNApol	70	55.414	MGP_PahariEiJ_G0030951	Polrmt	100	53.089	Mus_pahari
FBgn0261938	mtRNApol	72	55.981	MGP_SPRETEiJ_G0016356	Polrmt	100	53.899	Mus_spretus
FBgn0261938	mtRNApol	77	41.878	ENSMPUG00000009910	POLRMT	82	41.784	Mustela_putorius_furo
FBgn0261938	mtRNApol	79	42.265	ENSMLUG00000009223	POLRMT	84	42.081	Myotis_lucifugus
FBgn0261938	mtRNApol	71	54.762	ENSNGAG00000005498	Polrmt	82	54.849	Nannospalax_galili
FBgn0261938	mtRNApol	77	43.195	ENSNBRG00000023530	polrmt	76	43.195	Neolamprologus_brichardi
FBgn0261938	mtRNApol	81	40.804	ENSNLEG00000000718	POLRMT	85	40.714	Nomascus_leucogenys
FBgn0261938	mtRNApol	58	45.443	ENSOPRG00000013579	POLRMT	66	46.856	Ochotona_princeps
FBgn0261938	mtRNApol	78	43.446	ENSONIG00000002405	polrmt	89	43.454	Oreochromis_niloticus
FBgn0261938	mtRNApol	78	43.843	ENSORLG00000004329	polrmt	76	43.843	Oryzias_latipes
FBgn0261938	mtRNApol	78	43.750	ENSORLG00020003896	polrmt	78	43.750	Oryzias_latipes_hni
FBgn0261938	mtRNApol	78	43.592	ENSORLG00015022238	polrmt	75	43.592	Oryzias_latipes_hsok
FBgn0261938	mtRNApol	78	43.568	ENSOMEG00000008292	polrmt	79	43.527	Oryzias_melastigma
FBgn0261938	mtRNApol	77	42.416	ENSOGAG00000007912	POLRMT	82	41.893	Otolemur_garnettii
FBgn0261938	mtRNApol	65	40.502	ENSOARG00000008898	POLRMT	75	58.836	Ovis_aries
FBgn0261938	mtRNApol	77	40.918	ENSPPAG00000043321	-	81	40.824	Pan_paniscus
FBgn0261938	mtRNApol	77	41.550	ENSPPAG00000030853	POLRMT	81	41.457	Pan_paniscus
FBgn0261938	mtRNApol	61	51.590	ENSPPRG00000001547	POLRMT	71	51.441	Panthera_pardus
FBgn0261938	mtRNApol	77	41.292	ENSPTRG00000039638	-	81	41.199	Pan_troglodytes
FBgn0261938	mtRNApol	77	42.095	ENSPTRG00000010157	POLRMT	78	42.002	Pan_troglodytes
FBgn0261938	mtRNApol	77	41.953	ENSPANG00000006649	POLRMT	82	41.767	Papio_anubis
FBgn0261938	mtRNApol	81	41.696	ENSPKIG00000024580	polrmt	84	41.696	Paramormyrops_kingsleyae
FBgn0261938	mtRNApol	77	43.165	ENSPMGG00000014627	polrmt	85	43.165	Periophthalmus_magnuspinnatus
FBgn0261938	mtRNApol	70	55.609	ENSPEMG00000011671	Polrmt	82	55.288	Peromyscus_maniculatus_bairdii
FBgn0261938	mtRNApol	66	40.594	ENSPMAG00000005070	-	99	40.594	Petromyzon_marinus
FBgn0261938	mtRNApol	75	42.704	ENSPCIG00000006103	POLRMT	83	41.729	Phascolarctos_cinereus
FBgn0261938	mtRNApol	78	44.030	ENSPFOG00000003911	polrmt	92	39.364	Poecilia_formosa
FBgn0261938	mtRNApol	66	42.128	ENSPLAG00000005743	polrmt	81	39.715	Poecilia_latipinna
FBgn0261938	mtRNApol	57	34.864	ENSPMEG00000011484	polrmt	84	34.826	Poecilia_mexicana
FBgn0261938	mtRNApol	78	43.563	ENSPMEG00000008947	polrmt	83	43.563	Poecilia_mexicana
FBgn0261938	mtRNApol	78	43.843	ENSPREG00000007650	polrmt	77	43.843	Poecilia_reticulata
FBgn0261938	mtRNApol	73	52.066	ENSPPYG00000009282	POLRMT	83	52.066	Pongo_abelii
FBgn0261938	mtRNApol	69	54.787	ENSPCAG00000010816	POLRMT	74	54.787	Procavia_capensis
FBgn0261938	mtRNApol	77	40.913	ENSPCOG00000014539	POLRMT	82	40.730	Propithecus_coquereli
FBgn0261938	mtRNApol	77	41.425	ENSPVAG00000008403	POLRMT	83	41.061	Pteropus_vampyrus
FBgn0261938	mtRNApol	78	43.364	ENSPNYG00000020790	polrmt	77	43.364	Pundamilia_nyererei
FBgn0261938	mtRNApol	77	44.528	ENSPNAG00000019790	polrmt	79	45.177	Pygocentrus_nattereri
FBgn0261938	mtRNApol	78	43.004	ENSRNOG00000024879	Polrmt	84	42.910	Rattus_norvegicus
FBgn0261938	mtRNApol	77	42.056	ENSRBIG00000006728	POLRMT	82	42.110	Rhinopithecus_bieti
FBgn0261938	mtRNApol	77	42.365	ENSRROG00000040809	POLRMT	82	42.419	Rhinopithecus_roxellana
FBgn0261938	mtRNApol	58	34.428	YFL036W	-	58	34.024	Saccharomyces_cerevisiae
FBgn0261938	mtRNApol	77	42.467	ENSSBOG00000025388	POLRMT	82	42.279	Saimiri_boliviensis_boliviensis
FBgn0261938	mtRNApol	61	45.629	ENSSHAG00000009387	-	100	45.335	Sarcophilus_harrisii
FBgn0261938	mtRNApol	77	42.992	ENSSFOG00015005074	polrmt	83	42.992	Scleropages_formosus
FBgn0261938	mtRNApol	78	43.068	ENSSMAG00000011851	polrmt	78	43.068	Scophthalmus_maximus
FBgn0261938	mtRNApol	77	43.462	ENSSDUG00000004410	polrmt	82	42.897	Seriola_dumerili
FBgn0261938	mtRNApol	77	43.205	ENSSLDG00000010643	polrmt	82	42.643	Seriola_lalandi_dorsalis
FBgn0261938	mtRNApol	79	43.132	ENSSPAG00000018740	polrmt	80	43.132	Stegastes_partitus
FBgn0261938	mtRNApol	78	41.302	ENSSSCG00000035693	POLRMT	84	41.520	Sus_scrofa
FBgn0261938	mtRNApol	74	43.529	ENSTGUG00000000621	POLRMT	100	43.585	Taeniopygia_guttata
FBgn0261938	mtRNApol	78	43.005	ENSTRUG00000018040	polrmt	84	42.777	Takifugu_rubripes
FBgn0261938	mtRNApol	77	43.879	ENSTNIG00000010642	polrmt	100	43.879	Tetraodon_nigroviridis
FBgn0261938	mtRNApol	59	57.737	ENSTTRG00000011329	POLRMT	60	61.458	Tursiops_truncatus
FBgn0261938	mtRNApol	77	41.854	ENSUAMG00000019616	POLRMT	82	41.830	Ursus_americanus
FBgn0261938	mtRNApol	72	40.258	ENSVVUG00000022627	POLRMT	80	40.396	Vulpes_vulpes
FBgn0261938	mtRNApol	77	43.556	ENSXETG00000006545	polrmt	83	43.556	Xenopus_tropicalis
FBgn0261938	mtRNApol	78	43.312	ENSXMAG00000012464	polrmt	80	42.750	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001018	mitochondrial promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	ISS	Function
GO:0005739	mitochondrion	-	ISS	Component
GO:0006351	transcription, DNA-templated	-	ISS	Process
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0034245	mitochondrial DNA-directed RNA polymerase complex	21873635.	IBA	Component