EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0261955 (Gene tree)
Gene ID: 31579
Gene Symbol: kdn
Alias: -
Full Name: knockdown
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 10695
Position: chrX: 6350629-6361323
Accession: FBgn0261955
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070907	-	2510	-	FBpp0070872	464 (aa)	-	Q9W401
FBtr0070906	-	2636	-	FBpp0070871	522 (aa)	-	Q8T9J9

Gene Model

Click here to download FBgn0261955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0261955's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0261955	kdn	99	64.935	WBGene00000833	cts-1	99	64.935	Caenorhabditis_elegans
FBgn0261955	kdn	94	73.288	ENSG00000062485	CS	98	80.165	Homo_sapiens
FBgn0261955	kdn	94	73.059	ENSMUSG00000005683	Cs	94	73.059	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004108	citrate (Si)-synthase activity	21873635.	IBA	Function
GO:0004108	citrate (Si)-synthase activity	1651203.	IDA	Function
GO:0004108	citrate (Si)-synthase activity	-	ISS	Function
GO:0005739	mitochondrion	16212416.19317464.	HDA	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0005759	mitochondrial matrix	-	ISS	Component
GO:0005975	carbohydrate metabolic process	21873635.	IBA	Process
GO:0005975	carbohydrate metabolic process	-	ISS	Process
GO:0006099	tricarboxylic acid cycle	21873635.	IBA	Process