EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0262125 (Gene tree)
Gene ID: 40694
Gene Symbol: Sec23
Alias: -
Full Name: Secretory 23
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3565
Position: chr3R: 5649065-5652629
Accession: FBgn0262125
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0304794	-	2819	-	FBpp0293334	780 (aa)	-	A0A0B4K6T4
FBtr0330314	-	2590	-	FBpp0303346	773 (aa)	-	Q8IGT0
FBtr0309091	-	2701	-	FBpp0301099	781 (aa)	-	A0A0B4K5Z8
FBtr0078710	-	2798	-	FBpp0078359	773 (aa)	-	Q9VNF8
FBtr0078711	-	2706	-	FBpp0078360	773 (aa)	-	Q9VNF8
FBtr0339320	-	2677	-	FBpp0308424	773 (aa)	-	Q9VNF8
FBtr0310266	-	2698	-	FBpp0301949	780 (aa)	-	A0A0B4K6T4

Gene Model

Click here to download FBgn0262125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0262125's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0262125	Sec23	99	74.065	ENSG00000100934	SEC23A	99	81.522	Homo_sapiens
FBgn0262125	Sec23	99	73.930	ENSG00000101310	SEC23B	100	81.356	Homo_sapiens
FBgn0262125	Sec23	99	50.065	YPR181C		99	49.935	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003331	positive regulation of extracellular matrix constituent secretion	20520821.	IMP	Process
GO:0003400	regulation of COPII vesicle coating	-	ISS	Process
GO:0005096	GTPase activator activity	-	ISS	Function
GO:0005783	endoplasmic reticulum	11514618.	IDA	Component
GO:0005795	Golgi stack	11514618.	IDA	Component
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0007029	endoplasmic reticulum organization	20520821.	IMP	Process
GO:0007030	Golgi organization	11514618.	IGI	Process
GO:0007030	Golgi organization	20520821.	IMP	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0008360	regulation of cell shape	20520821.	IMP	Process
GO:0008363	larval chitin-based cuticle development	15901661.	IMP	Process
GO:0016203	muscle attachment	20520821.	IMP	Process
GO:0022409	positive regulation of cell-cell adhesion	20520821.	IMP	Process
GO:0030011	maintenance of cell polarity	20520821.	IMP	Process
GO:0030127	COPII vesicle coat	-	ISS	Component
GO:0030134	COPII-coated ER to Golgi transport vesicle	11514618.	TAS	Component
GO:0034394	protein localization to cell surface	20520821.	IMP	Process
GO:0035149	lumen formation, open tracheal system	20520821.	IMP	Process
GO:0035293	chitin-based larval cuticle pattern formation	15901661.	IMP	Process
GO:0040003	chitin-based cuticle development	20520821.	IMP	Process
GO:0043547	positive regulation of GTPase activity	-	ISS	Process
GO:0048081	positive regulation of cuticle pigmentation	20520821.	IMP	Process
GO:0050775	positive regulation of dendrite morphogenesis	17719548.	IMP	Process
GO:0070971	endoplasmic reticulum exit site	15385627.18614796.	IDA	Component
GO:0071711	basement membrane organization	20520821.	IMP	Process
GO:0072659	protein localization to plasma membrane	25753515.	IMP	Process