EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0262954 (Gene tree)
Gene ID: 5740790
Gene Symbol: Rpb12
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 552 bases
Position: chr2R:15144968-15145519
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0111294	DNA_RNApol_7kD	PF03604.13	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0112379	-	353	-	FBpp0111294	57 (aa)	-	Q6IGE3

Gene Model

Click here to download FBgn0262954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0262954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0262954	Rpb12	82	82.979	ENSG00000147669	POLR2K	81	82.979	Homo_sapiens
FBgn0262954	Rpb12	82	82.979	ENSAMEG00000000452	POLR2K	81	82.979	Ailuropoda_melanoleuca
FBgn0262954	Rpb12	82	82.979	ENSAPEG00000010759	polr2k	75	89.474	Amphiprion_percula
FBgn0262954	Rpb12	82	82.979	ENSATEG00000013218	polr2k	81	82.979	Anabas_testudineus
FBgn0262954	Rpb12	98	69.643	ENSACAG00000020961	POLR2K	97	69.643	Anolis_carolinensis
FBgn0262954	Rpb12	82	82.979	ENSANAG00000031482	-	81	82.979	Aotus_nancymaae
FBgn0262954	Rpb12	81	76.087	ENSANAG00000030159	-	81	76.087	Aotus_nancymaae
FBgn0262954	Rpb12	82	59.184	ENSAMXG00000038868	-	80	59.184	Astyanax_mexicanus
FBgn0262954	Rpb12	86	69.388	ENSBTAG00000052277	-	73	69.388	Bos_taurus
FBgn0262954	Rpb12	82	82.979	ENSBTAG00000022539	POLR2K	81	82.979	Bos_taurus
FBgn0262954	Rpb12	82	82.979	ENSCJAG00000022168	-	81	82.979	Callithrix_jacchus
FBgn0262954	Rpb12	82	82.979	ENSCJAG00000041308	-	66	82.979	Callithrix_jacchus
FBgn0262954	Rpb12	82	78.723	ENSCAFG00000032117	POLR2K	81	78.723	Canis_familiaris
FBgn0262954	Rpb12	82	82.979	ENSCAFG00020000296	-	81	82.979	Canis_lupus_dingo
FBgn0262954	Rpb12	82	73.585	ENSCAFG00020011172	-	83	73.585	Canis_lupus_dingo
FBgn0262954	Rpb12	82	78.723	ENSCAFG00020023694	-	81	78.723	Canis_lupus_dingo
FBgn0262954	Rpb12	82	82.979	ENSCHIG00000012813	POLR2K	81	82.979	Capra_hircus
FBgn0262954	Rpb12	82	82.979	ENSCHIG00000007790	-	82	82.979	Capra_hircus
FBgn0262954	Rpb12	81	80.435	ENSTSYG00000032761	-	81	80.435	Carlito_syrichta
FBgn0262954	Rpb12	82	80.851	ENSTSYG00000035576	-	81	80.851	Carlito_syrichta
FBgn0262954	Rpb12	70	80.000	ENSCAPG00000017627	POLR2K	83	80.000	Cavia_aperea
FBgn0262954	Rpb12	98	71.429	ENSCPOG00000036717	POLR2K	97	71.429	Cavia_porcellus
FBgn0262954	Rpb12	82	82.979	ENSCCAG00000004867	-	81	82.979	Cebus_capucinus
FBgn0262954	Rpb12	82	82.979	ENSCCAG00000019633	-	81	82.979	Cebus_capucinus
FBgn0262954	Rpb12	81	78.261	ENSCCAG00000002072	-	81	78.261	Cebus_capucinus
FBgn0262954	Rpb12	82	82.979	ENSCATG00000007143	POLR2K	81	82.979	Cercocebus_atys
FBgn0262954	Rpb12	82	82.979	ENSCLAG00000010033	POLR2K	81	82.979	Chinchilla_lanigera
FBgn0262954	Rpb12	82	82.979	ENSCSAG00000012163	POLR2K	81	82.979	Chlorocebus_sabaeus
FBgn0262954	Rpb12	70	80.000	ENSCHOG00000008820	-	78	80.000	Choloepus_hoffmanni
FBgn0262954	Rpb12	82	82.979	ENSCHOG00000003599	POLR2K	81	82.979	Choloepus_hoffmanni
FBgn0262954	Rpb12	77	79.545	ENSCHOG00000000784	-	76	79.545	Choloepus_hoffmanni
FBgn0262954	Rpb12	82	82.979	ENSCANG00000041713	POLR2K	81	82.979	Colobus_angolensis_palliatus
FBgn0262954	Rpb12	82	82.979	ENSCGRG00000011617	Polr2k	81	82.979	Cricetulus_griseus_crigri
FBgn0262954	Rpb12	82	82.979	ENSCSEG00000017377	polr2k	81	82.979	Cynoglossus_semilaevis
FBgn0262954	Rpb12	82	82.979	ENSCVAG00000005198	polr2k	81	82.979	Cyprinodon_variegatus
FBgn0262954	Rpb12	82	82.979	ENSCVAG00000022985	-	81	82.979	Cyprinodon_variegatus
FBgn0262954	Rpb12	98	71.429	ENSDARG00000075616	polr2k	97	71.429	Danio_rerio
FBgn0262954	Rpb12	82	80.851	ENSDNOG00000030774	-	81	80.851	Dasypus_novemcinctus
FBgn0262954	Rpb12	82	78.723	ENSDNOG00000047079	-	81	78.723	Dasypus_novemcinctus
FBgn0262954	Rpb12	82	82.979	ENSDNOG00000049353	-	81	82.979	Dasypus_novemcinctus
FBgn0262954	Rpb12	82	78.723	ENSDNOG00000038181	-	53	78.723	Dasypus_novemcinctus
FBgn0262954	Rpb12	82	80.851	ENSDORG00000028386	Polr2k	81	80.851	Dipodomys_ordii
FBgn0262954	Rpb12	82	82.979	ENSEASG00005002840	-	81	82.979	Equus_asinus_asinus
FBgn0262954	Rpb12	82	82.979	ENSECAG00000021345	POLR2K	81	82.979	Equus_caballus
FBgn0262954	Rpb12	81	71.739	ENSECAG00000029464	-	58	71.739	Equus_caballus
FBgn0262954	Rpb12	70	77.500	ENSEEUG00000015727	POLR2K	78	77.500	Erinaceus_europaeus
FBgn0262954	Rpb12	98	71.429	ENSFALG00000005795	POLR2K	97	71.429	Ficedula_albicollis
FBgn0262954	Rpb12	82	82.979	ENSFDAG00000000348	POLR2K	81	82.979	Fukomys_damarensis
FBgn0262954	Rpb12	70	75.000	ENSFDAG00000018794	-	78	75.000	Fukomys_damarensis
FBgn0262954	Rpb12	88	68.627	ENSFHEG00000019707	-	86	68.627	Fundulus_heteroclitus
FBgn0262954	Rpb12	82	82.979	ENSGAFG00000010349	polr2k	81	82.979	Gambusia_affinis
FBgn0262954	Rpb12	98	71.429	ENSGAGG00000009919	POLR2K	97	71.429	Gopherus_agassizii
FBgn0262954	Rpb12	82	82.979	ENSGGOG00000024539	POLR2K	81	82.979	Gorilla_gorilla
FBgn0262954	Rpb12	82	70.213	ENSGGOG00000015089	-	85	70.213	Gorilla_gorilla
FBgn0262954	Rpb12	82	82.979	ENSHBUG00000002269	polr2k	81	82.979	Haplochromis_burtoni
FBgn0262954	Rpb12	74	88.095	ENSHGLG00000021192	-	72	88.095	Heterocephalus_glaber_female
FBgn0262954	Rpb12	82	82.979	ENSHGLG00000004285	POLR2K	81	82.979	Heterocephalus_glaber_female
FBgn0262954	Rpb12	82	82.979	ENSHGLG00100005467	POLR2K	81	82.979	Heterocephalus_glaber_male
FBgn0262954	Rpb12	82	78.723	ENSHCOG00000016287	polr2k	81	78.723	Hippocampus_comes
FBgn0262954	Rpb12	82	78.723	ENSSTOG00000032566	-	96	78.723	Ictidomys_tridecemlineatus
FBgn0262954	Rpb12	82	82.979	ENSSTOG00000006123	-	81	82.979	Ictidomys_tridecemlineatus
FBgn0262954	Rpb12	77	72.727	ENSJJAG00000000698	-	76	72.727	Jaculus_jaculus
FBgn0262954	Rpb12	82	80.851	ENSJJAG00000000271	-	81	80.851	Jaculus_jaculus
FBgn0262954	Rpb12	77	72.727	ENSJJAG00000016100	-	69	72.727	Jaculus_jaculus
FBgn0262954	Rpb12	82	80.851	ENSJJAG00000014209	-	81	80.851	Jaculus_jaculus
FBgn0262954	Rpb12	81	69.565	ENSJJAG00000012986	-	79	69.565	Jaculus_jaculus
FBgn0262954	Rpb12	82	82.979	ENSKMAG00000007731	polr2k	81	82.979	Kryptolebias_marmoratus
FBgn0262954	Rpb12	82	82.979	ENSKMAG00000016379	-	81	82.979	Kryptolebias_marmoratus
FBgn0262954	Rpb12	98	69.643	ENSLBEG00000027114	polr2k	97	69.643	Labrus_bergylta
FBgn0262954	Rpb12	82	82.979	ENSLACG00000015753	POLR2K	80	82.979	Latimeria_chalumnae
FBgn0262954	Rpb12	98	71.429	ENSLOCG00000009730	polr2k	97	71.429	Lepisosteus_oculatus
FBgn0262954	Rpb12	81	78.261	ENSLAFG00000005254	-	81	78.261	Loxodonta_africana
FBgn0262954	Rpb12	70	72.500	ENSMFAG00000039166	-	58	72.500	Macaca_fascicularis
FBgn0262954	Rpb12	82	82.979	ENSMFAG00000030863	-	81	82.979	Macaca_fascicularis
FBgn0262954	Rpb12	82	82.979	ENSMMUG00000020714	-	81	82.979	Macaca_mulatta
FBgn0262954	Rpb12	81	69.565	ENSMMUG00000040264	-	81	69.565	Macaca_mulatta
FBgn0262954	Rpb12	82	82.979	ENSMNEG00000023503	-	81	82.979	Macaca_nemestrina
FBgn0262954	Rpb12	70	72.500	ENSMNEG00000033552	-	58	72.500	Macaca_nemestrina
FBgn0262954	Rpb12	82	72.340	ENSMLEG00000012572	-	69	72.340	Mandrillus_leucophaeus
FBgn0262954	Rpb12	82	82.979	ENSMLEG00000038200	POLR2K	81	82.979	Mandrillus_leucophaeus
FBgn0262954	Rpb12	82	82.979	ENSMAMG00000014290	polr2k	81	82.979	Mastacembelus_armatus
FBgn0262954	Rpb12	82	82.979	ENSMZEG00005003220	polr2k	81	82.979	Maylandia_zebra
FBgn0262954	Rpb12	82	82.979	ENSMAUG00000010288	Polr2k	81	82.979	Mesocricetus_auratus
FBgn0262954	Rpb12	82	82.979	ENSMICG00000044624	POLR2K	81	82.979	Microcebus_murinus
FBgn0262954	Rpb12	82	82.979	ENSMOCG00000009880	Polr2k	81	82.979	Microtus_ochrogaster
FBgn0262954	Rpb12	98	71.429	ENSMMOG00000017945	polr2k	97	71.429	Mola_mola
FBgn0262954	Rpb12	82	82.979	ENSMODG00000006312	POLR2K	81	82.979	Monodelphis_domestica
FBgn0262954	Rpb12	82	82.979	MGP_CAROLIEiJ_G0019735	Polr2k	81	82.979	Mus_caroli
FBgn0262954	Rpb12	82	82.979	ENSMUSG00000045996	Polr2k	81	82.979	Mus_musculus
FBgn0262954	Rpb12	82	82.979	MGP_PahariEiJ_G0019744	-	81	82.979	Mus_pahari
FBgn0262954	Rpb12	82	82.979	MGP_SPRETEiJ_G0020631	Polr2k	81	82.979	Mus_spretus
FBgn0262954	Rpb12	81	76.087	ENSMLUG00000029803	-	81	76.087	Myotis_lucifugus
FBgn0262954	Rpb12	98	69.643	ENSMLUG00000030053	-	97	69.643	Myotis_lucifugus
FBgn0262954	Rpb12	82	82.979	ENSNGAG00000020950	Polr2k	81	82.979	Nannospalax_galili
FBgn0262954	Rpb12	82	82.979	ENSNBRG00000013533	polr2k	81	82.979	Neolamprologus_brichardi
FBgn0262954	Rpb12	82	68.085	ENSNLEG00000018544	-	85	68.085	Nomascus_leucogenys
FBgn0262954	Rpb12	74	76.190	ENSNLEG00000031897	-	55	76.190	Nomascus_leucogenys
FBgn0262954	Rpb12	82	82.979	ENSMEUG00000000401	POLR2K	81	82.979	Notamacropus_eugenii
FBgn0262954	Rpb12	82	82.979	ENSOPRG00000009562	-	81	82.979	Ochotona_princeps
FBgn0262954	Rpb12	82	61.702	ENSOPRG00000010172	-	81	61.702	Ochotona_princeps
FBgn0262954	Rpb12	82	72.340	ENSOPRG00000005504	-	81	72.340	Ochotona_princeps
FBgn0262954	Rpb12	77	77.273	ENSOPRG00000015675	-	76	77.273	Ochotona_princeps
FBgn0262954	Rpb12	79	80.000	ENSODEG00000020129	-	78	80.000	Octodon_degus
FBgn0262954	Rpb12	82	82.979	ENSODEG00000019784	-	81	82.979	Octodon_degus
FBgn0262954	Rpb12	82	82.979	ENSODEG00000004358	-	81	82.979	Octodon_degus
FBgn0262954	Rpb12	82	82.979	ENSODEG00000018618	-	81	82.979	Octodon_degus
FBgn0262954	Rpb12	77	86.364	ENSODEG00000019324	-	76	86.364	Octodon_degus
FBgn0262954	Rpb12	82	78.723	ENSODEG00000020322	-	81	78.723	Octodon_degus
FBgn0262954	Rpb12	82	82.979	ENSOCUG00000029376	-	81	82.979	Oryctolagus_cuniculus
FBgn0262954	Rpb12	82	80.851	ENSOCUG00000016854	-	81	80.851	Oryctolagus_cuniculus
FBgn0262954	Rpb12	82	82.979	ENSORLG00015010501	polr2k	81	82.979	Oryzias_latipes_hsok
FBgn0262954	Rpb12	82	82.979	ENSOARG00000001480	POLR2K	81	82.979	Ovis_aries
FBgn0262954	Rpb12	82	82.979	ENSPPAG00000040441	POLR2K	81	82.979	Pan_paniscus
FBgn0262954	Rpb12	82	82.979	ENSPTRG00000020470	POLR2K	81	82.979	Pan_troglodytes
FBgn0262954	Rpb12	82	82.979	ENSPANG00000011129	-	81	82.979	Papio_anubis
FBgn0262954	Rpb12	98	71.429	ENSPSIG00000004097	POLR2K	97	71.429	Pelodiscus_sinensis
FBgn0262954	Rpb12	82	82.979	ENSPMGG00000022982	polr2k	81	82.979	Periophthalmus_magnuspinnatus
FBgn0262954	Rpb12	82	82.979	ENSPEMG00000012015	-	81	82.979	Peromyscus_maniculatus_bairdii
FBgn0262954	Rpb12	82	68.085	ENSPEMG00000001038	-	58	68.085	Peromyscus_maniculatus_bairdii
FBgn0262954	Rpb12	82	76.596	ENSPEMG00000008788	-	81	76.596	Peromyscus_maniculatus_bairdii
FBgn0262954	Rpb12	82	82.979	ENSPMEG00000022211	polr2k	81	82.979	Poecilia_mexicana
FBgn0262954	Rpb12	82	82.979	ENSPPYG00000018786	POLR2K	81	82.979	Pongo_abelii
FBgn0262954	Rpb12	82	82.979	ENSPCAG00000000746	POLR2K	81	82.979	Procavia_capensis
FBgn0262954	Rpb12	82	78.723	ENSPCOG00000007173	-	81	78.723	Propithecus_coquereli
FBgn0262954	Rpb12	82	80.851	ENSPCOG00000026981	-	81	80.851	Propithecus_coquereli
FBgn0262954	Rpb12	82	82.979	ENSPVAG00000009991	POLR2K	81	82.979	Pteropus_vampyrus
FBgn0262954	Rpb12	82	82.979	ENSPNYG00000012241	polr2k	81	82.979	Pundamilia_nyererei
FBgn0262954	Rpb12	82	82.979	ENSRNOG00000010408	Polr2k	81	82.979	Rattus_norvegicus
FBgn0262954	Rpb12	82	82.979	ENSRBIG00000035082	POLR2K	81	82.979	Rhinopithecus_bieti
FBgn0262954	Rpb12	82	70.213	ENSRBIG00000032617	-	66	70.213	Rhinopithecus_bieti
FBgn0262954	Rpb12	82	70.213	ENSRROG00000036861	-	66	70.213	Rhinopithecus_roxellana
FBgn0262954	Rpb12	82	82.979	ENSRROG00000043844	-	81	82.979	Rhinopithecus_roxellana
FBgn0262954	Rpb12	82	82.979	ENSSBOG00000010968	-	81	82.979	Saimiri_boliviensis_boliviensis
FBgn0262954	Rpb12	82	80.851	ENSSBOG00000019574	-	81	80.851	Saimiri_boliviensis_boliviensis
FBgn0262954	Rpb12	77	75.000	ENSSBOG00000028601	-	85	75.000	Saimiri_boliviensis_boliviensis
FBgn0262954	Rpb12	82	82.979	ENSSHAG00000006381	POLR2K	81	82.979	Sarcophilus_harrisii
FBgn0262954	Rpb12	82	82.979	ENSSFOG00015002881	polr2k	81	82.979	Scleropages_formosus
FBgn0262954	Rpb12	82	82.979	ENSSMAG00000007196	polr2k	81	82.979	Scophthalmus_maximus
FBgn0262954	Rpb12	82	82.979	ENSSLDG00000013975	polr2k	81	82.979	Seriola_lalandi_dorsalis
FBgn0262954	Rpb12	70	80.000	ENSSARG00000001557	POLR2K	78	80.000	Sorex_araneus
FBgn0262954	Rpb12	82	82.979	ENSSPUG00000018205	POLR2K	81	82.979	Sphenodon_punctatus
FBgn0262954	Rpb12	82	82.979	ENSSSCG00000021180	POLR2K	81	82.979	Sus_scrofa
FBgn0262954	Rpb12	82	76.596	ENSSSCG00000037160	-	81	76.596	Sus_scrofa
FBgn0262954	Rpb12	81	80.435	ENSSSCG00000036795	-	94	80.435	Sus_scrofa
FBgn0262954	Rpb12	98	71.429	ENSTGUG00000012051	-	97	71.429	Taeniopygia_guttata
FBgn0262954	Rpb12	98	71.429	ENSTGUG00000018366	-	97	71.429	Taeniopygia_guttata
FBgn0262954	Rpb12	82	82.979	ENSTBEG00000010260	-	81	82.979	Tupaia_belangeri
FBgn0262954	Rpb12	81	71.739	ENSTBEG00000003799	-	79	71.739	Tupaia_belangeri
FBgn0262954	Rpb12	82	82.979	ENSTTRG00000007489	POLR2K	81	82.979	Tursiops_truncatus
FBgn0262954	Rpb12	77	59.091	ENSUAMG00000008073	-	62	59.091	Ursus_americanus
FBgn0262954	Rpb12	77	59.091	ENSUMAG00000021763	-	62	59.091	Ursus_maritimus
FBgn0262954	Rpb12	82	82.979	ENSUMAG00000017508	-	81	82.979	Ursus_maritimus
FBgn0262954	Rpb12	82	82.979	ENSVPAG00000009630	POLR2K	81	82.979	Vicugna_pacos
FBgn0262954	Rpb12	82	82.979	ENSXETG00000025929	polr2k	81	82.979	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0001055	RNA polymerase II activity	21873635.	IBA	Function
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	10908585.	NAS	Function
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	-	ISS	Component
GO:0005665	RNA polymerase II, core complex	10908585.	NAS	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006366	transcription by RNA polymerase II	-	ISS	Process
GO:0006366	transcription by RNA polymerase II	10908585.	NAS	Process
GO:0008270	zinc ion binding	-	IEA	Function