EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0263121 (Gene tree)
Gene ID: 45780
Gene Symbol: Prosalpha1
Alias: -
Full Name: Proteasome alpha1 subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1376
Position: chr2R: 7827303-7828678
Accession: FBgn0263121
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088896	-	902	-	FBpp0087970	244 (aa)	-	Q9XZJ4
FBtr0088895	-	969	-	FBpp0087969	244 (aa)	-	Q9XZJ4

Gene Model

Click here to download FBgn0263121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0263121's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0263121	Prosalpha1	100	52.846	WBGene00003922	pas-1	100	52.846	Caenorhabditis_elegans
FBgn0263121	Prosalpha1	100	100.000	FBgn0050382	CG30382	100	100.000	Drosophila_melanogaster
FBgn0263121	Prosalpha1	97	48.560	YGL011C	SCL1	98	48.790	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000502	proteasome complex	19581588.	IDA	Component
GO:0004175	endopeptidase activity	21873635.	IBA	Function
GO:0004175	endopeptidase activity	14652013.	IC	Function
GO:0004298	threonine-type endopeptidase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005839	proteasome core complex	21873635.	IBA	Component
GO:0005839	proteasome core complex	14652013.	IDA	Component
GO:0010498	proteasomal protein catabolic process	21873635.	IBA	Process
GO:0010499	proteasomal ubiquitin-independent protein catabolic process	21873635.	IBA	Process
GO:0019773	proteasome core complex, alpha-subunit complex	21873635.	IBA	Component
GO:0019773	proteasome core complex, alpha-subunit complex	-	ISS	Component
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	14652013.	IC	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	23800266.	IMP	Process