EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0263603 (Gene tree)
Gene ID
39764
Gene Symbol
Zn72D
Alias
-
Full Name
Zinc-finger protein at 72D
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Minus strand
Length
6033 bases
Position
chr3L:16106594-16112626
Accession
FBgn0263603
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0075249DZFPF07528.142.3e-5011
FBpp0302718DZFPF07528.142.3e-5011
FBpp0302719DZFPF07528.142.3e-5011
FBpp0305489DZFPF07528.142.3e-5011
FBpp0075248DZFPF07528.142.7e-0611
FBpp0305488DZFPF07528.143.4e-0611
FBpp0305488zf-metPF12874.78.8e-2213
FBpp0305488zf-metPF12874.78.8e-2223
FBpp0305488zf-metPF12874.78.8e-2233
FBpp0075248zf-metPF12874.79.1e-2213
FBpp0075248zf-metPF12874.79.1e-2223
FBpp0075248zf-metPF12874.79.1e-2233
FBpp0075249zf-metPF12874.72.9e-2113
FBpp0075249zf-metPF12874.72.9e-2123
FBpp0075249zf-metPF12874.72.9e-2133
FBpp0302718zf-metPF12874.72.9e-2113
FBpp0302718zf-metPF12874.72.9e-2123
FBpp0302718zf-metPF12874.72.9e-2133
FBpp0302719zf-metPF12874.72.9e-2113
FBpp0302719zf-metPF12874.72.9e-2123
FBpp0302719zf-metPF12874.72.9e-2133
FBpp0305489zf-metPF12874.72.9e-2113
FBpp0305489zf-metPF12874.72.9e-2123
FBpp0305489zf-metPF12874.72.9e-2133
FBpp0305488zf-C2H2_jazPF12171.87.2e-1511
FBpp0075248zf-C2H2_jazPF12171.87.4e-1511
FBpp0075249zf-C2H2_jazPF12171.82.6e-1411
FBpp0302718zf-C2H2_jazPF12171.82.6e-1411
FBpp0302719zf-C2H2_jazPF12171.82.6e-1411
FBpp0305489zf-C2H2_jazPF12171.82.6e-1411
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0310581-3106-FBpp0302718884 (aa)-Q86BI3
FBtr0310582-3240-FBpp0302719884 (aa)-Q86BI3
FBtr0075494-3207-FBpp0075249884 (aa)-Q86BI3
FBtr0333294-3423-FBpp0305489884 (aa)-Q86BI3
FBtr0333293-5042-FBpp0305488631 (aa)-F0JAG2
FBtr0075493-3410-FBpp0075248635 (aa)-Q94540
Gene Model
Click here to download FBgn0263603's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0263603's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0263603Zn72D7730.926WBGene00022388Y95B8A.88230.258Caenorhabditis_elegans
FBgn0263603Zn72D5734.717ENSCING00000004862-5135.283Ciona_intestinalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome18981222.ICProcess
GO:0003725double-stranded RNA binding21873635.IBAFunction
GO:0003727single-stranded RNA binding21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0008270zinc ion binding-IEAFunction
GO:0071011precatalytic spliceosome18981222.HDAComponent
GO:0071013catalytic step 2 spliceosome18981222.HDAComponent

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