EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0264270 (Gene tree)
Gene ID: 3772180
Gene Symbol: Sxl
Alias: -
Full Name: Sex lethal
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 23504 bases
Position: chrX:7074550-7098053
Accession: FBgn0264270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0303701	RRM_5	PF13893.6	6.1e-08	1	2
FBpp0303701	RRM_5	PF13893.6	6.1e-08	2	2
FBpp0303705	RRM_5	PF13893.6	6.1e-08	1	2
FBpp0303705	RRM_5	PF13893.6	6.1e-08	2	2
FBpp0307710	RRM_5	PF13893.6	6.6e-08	1	2
FBpp0307710	RRM_5	PF13893.6	6.6e-08	2	2
FBpp0312374	RRM_5	PF13893.6	7.3e-08	1	2
FBpp0312374	RRM_5	PF13893.6	7.3e-08	2	2
FBpp0303708	RRM_5	PF13893.6	8.2e-08	1	2
FBpp0303708	RRM_5	PF13893.6	8.2e-08	2	2
FBpp0303699	RRM_5	PF13893.6	8.2e-08	1	2
FBpp0303699	RRM_5	PF13893.6	8.2e-08	2	2
FBpp0303703	RRM_5	PF13893.6	8.2e-08	1	2
FBpp0303703	RRM_5	PF13893.6	8.2e-08	2	2
FBpp0303689	RRM_5	PF13893.6	8.4e-08	1	2
FBpp0303689	RRM_5	PF13893.6	8.4e-08	2	2
FBpp0303692	RRM_5	PF13893.6	8.4e-08	1	2
FBpp0303692	RRM_5	PF13893.6	8.4e-08	2	2
FBpp0303695	RRM_5	PF13893.6	8.4e-08	1	2
FBpp0303695	RRM_5	PF13893.6	8.4e-08	2	2
FBpp0303706	RRM_5	PF13893.6	9e-08	1	2
FBpp0303706	RRM_5	PF13893.6	9e-08	2	2
FBpp0303697	RRM_5	PF13893.6	9.1e-08	1	2
FBpp0303697	RRM_5	PF13893.6	9.1e-08	2	2
FBpp0303704	RRM_5	PF13893.6	9.1e-08	1	2
FBpp0303704	RRM_5	PF13893.6	9.1e-08	2	2
FBpp0303710	RRM_5	PF13893.6	9.1e-08	1	2
FBpp0303710	RRM_5	PF13893.6	9.1e-08	2	2
FBpp0303700	RRM_5	PF13893.6	9.6e-08	1	2
FBpp0303700	RRM_5	PF13893.6	9.6e-08	2	2
FBpp0303693	RRM_5	PF13893.6	9.8e-08	1	2
FBpp0303693	RRM_5	PF13893.6	9.8e-08	2	2
FBpp0303713	RRM_5	PF13893.6	4.8e-07	1	1
FBpp0303712	RRM_5	PF13893.6	4.8e-07	1	1
FBpp0303701	RRM_1	PF00076.22	4.9e-43	1	2
FBpp0303701	RRM_1	PF00076.22	4.9e-43	2	2
FBpp0303705	RRM_1	PF00076.22	4.9e-43	1	2
FBpp0303705	RRM_1	PF00076.22	4.9e-43	2	2
FBpp0307710	RRM_1	PF00076.22	5.3e-43	1	2
FBpp0307710	RRM_1	PF00076.22	5.3e-43	2	2
FBpp0312374	RRM_1	PF00076.22	5.8e-43	1	2
FBpp0312374	RRM_1	PF00076.22	5.8e-43	2	2
FBpp0303689	RRM_1	PF00076.22	6.4e-43	1	2
FBpp0303689	RRM_1	PF00076.22	6.4e-43	2	2
FBpp0303692	RRM_1	PF00076.22	6.4e-43	1	2
FBpp0303692	RRM_1	PF00076.22	6.4e-43	2	2
FBpp0303695	RRM_1	PF00076.22	6.4e-43	1	2
FBpp0303695	RRM_1	PF00076.22	6.4e-43	2	2
FBpp0303708	RRM_1	PF00076.22	6.5e-43	1	2
FBpp0303708	RRM_1	PF00076.22	6.5e-43	2	2
FBpp0303699	RRM_1	PF00076.22	6.6e-43	1	2
FBpp0303699	RRM_1	PF00076.22	6.6e-43	2	2
FBpp0303703	RRM_1	PF00076.22	6.6e-43	1	2
FBpp0303703	RRM_1	PF00076.22	6.6e-43	2	2
FBpp0303706	RRM_1	PF00076.22	6.9e-43	1	2
FBpp0303706	RRM_1	PF00076.22	6.9e-43	2	2
FBpp0303697	RRM_1	PF00076.22	6.9e-43	1	2
FBpp0303697	RRM_1	PF00076.22	6.9e-43	2	2
FBpp0303704	RRM_1	PF00076.22	6.9e-43	1	2
FBpp0303704	RRM_1	PF00076.22	6.9e-43	2	2
FBpp0303710	RRM_1	PF00076.22	6.9e-43	1	2
FBpp0303710	RRM_1	PF00076.22	6.9e-43	2	2
FBpp0303693	RRM_1	PF00076.22	7.4e-43	1	2
FBpp0303693	RRM_1	PF00076.22	7.4e-43	2	2
FBpp0303700	RRM_1	PF00076.22	7.5e-43	1	2
FBpp0303700	RRM_1	PF00076.22	7.5e-43	2	2
FBpp0303713	RRM_1	PF00076.22	3e-42	1	2
FBpp0303713	RRM_1	PF00076.22	3e-42	2	2
FBpp0303712	RRM_1	PF00076.22	3.1e-42	1	2
FBpp0303712	RRM_1	PF00076.22	3.1e-42	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0331255	-	1854	-	FBpp0303697	354 (aa)	-	P19339
FBtr0331254	-	2130	-	FBpp0303696	42 (aa)	-	M9PGW6
FBtr0331271	-	4077	-	FBpp0303713	708 (aa)	-	M9PHB3
FBtr0331256	-	4309	-	FBpp0303698	48 (aa)	-	M9PJB1
FBtr0331251	-	5164	-	FBpp0303693	366 (aa)	-	P19339-4
FBtr0331250	-	3227	-	FBpp0303692	346 (aa)	-	P19339-7
FBtr0331253	-	1886	-	FBpp0303695	346 (aa)	-	P19339-7
FBtr0331259	-	2933	-	FBpp0303701	314 (aa)	-	P19339-10
FBtr0331258	-	5964	-	FBpp0303700	364 (aa)	-	P19339-6
FBtr0331270	-	5164	-	FBpp0303712	722 (aa)	-	M9PGK6
FBtr0336728	-	2068	-	FBpp0307709	48 (aa)	-	M9PJB1
FBtr0331249	-	3263	-	FBpp0303691	48 (aa)	-	M9PJB1
FBtr0331257	-	2758	-	FBpp0303699	344 (aa)	-	E6PBY4
FBtr0331247	-	2892	-	FBpp0303689	344 (aa)	-	F0JAP9
FBtr0331260	-	2020	-	FBpp0303702	48 (aa)	-	M9PJB1
FBtr0331261	-	1515	-	FBpp0303703	344 (aa)	-	E6PBY4
FBtr0331262	-	3097	-	FBpp0303704	354 (aa)	-	P19339
FBtr0331263	-	2863	-	FBpp0303705	314 (aa)	-	P19339-10
FBtr0331264	-	4077	-	FBpp0303706	352 (aa)	-	P19339-5
FBtr0331265	-	2112	-	FBpp0303707	42 (aa)	-	M9PGW6
FBtr0331266	-	3738	-	FBpp0303708	342 (aa)	-	P19339-12
FBtr0336727	-	3317	-	FBpp0307708	42 (aa)	-	M9PGW6
FBtr0331268	-	1910	-	FBpp0303710	354 (aa)	-	P19339
FBtr0336729	-	1800	-	FBpp0307710	322 (aa)	-	A0A140B9G0
FBtr0346796	-	1776	-	FBpp0312374	331 (aa)	-	UPI0004F13DFE

Gene Model

Click here to download FBgn0264270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0264270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0264270	Sxl	58	39.286	FBgn0260400	elav	61	39.286
FBgn0264270	Sxl	57	35.897	FBgn0264001	bru3	54	35.897
FBgn0264270	Sxl	50	30.065	FBgn0005649	Rox8	59	30.065
FBgn0264270	Sxl	85	30.128	FBgn0265297	pAbp	59	32.828
FBgn0264270	Sxl	55	35.393	FBgn0052423	shep	51	35.393
FBgn0264270	Sxl	55	31.746	FBgn0032822	CG10466	77	31.746
FBgn0264270	Sxl	57	41.451	FBgn0086675	fne	58	39.130
FBgn0264270	Sxl	61	38.542	FBgn0038345	CG5213	70	40.571
FBgn0264270	Sxl	54	45.029	FBgn0010263	Rbp9	55	45.029

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	19727396.28675155.	IDA	Process
GO:0000900	translation repressor activity, mRNA regulatory element binding	12414187.	TAS	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0003730	mRNA 3'-UTR binding	16122421.	IDA	Function
GO:0005515	protein binding	10521666.11526072.14597576.17284519.19013444.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	22645327.	IDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0007131	reciprocal meiotic recombination	10648226.	TAS	Process
GO:0007446	imaginal disc growth	16207758.	IMP	Process
GO:0007530	sex determination	11105896.12596226.12683975.15382141.	TAS	Process
GO:0007541	sex determination, primary response to X:A ratio	10648226.	TAS	Process
GO:0007548	sex differentiation	12350340.	TAS	Process
GO:0007549	dosage compensation	1525829.8970731.11105896.12350340.12484523.	TAS	Process
GO:0008143	poly(A) binding	21873635.	IBA	Function
GO:0008187	poly-pyrimidine tract binding	10617208.	IDA	Function
GO:0008266	poly(U) RNA binding	21873635.	IBA	Function
GO:0008266	poly(U) RNA binding	10864047.	IDA	Function
GO:0009994	oocyte differentiation	17067567.	IDA	Process
GO:0017148	negative regulation of translation	16122421.	IDA	Process
GO:0017148	negative regulation of translation	16452508.	IMP	Process
GO:0018993	somatic sex determination	12484523.	TAS	Process
GO:0030237	female sex determination	28675155.	IMP	Process
GO:0032991	protein-containing complex	19013444.	IPI	Component
GO:0036002	pre-mRNA binding	28675155.	IDA	Function
GO:0045880	positive regulation of smoothened signaling pathway	16207758.	IDA	Process
GO:0048024	regulation of mRNA splicing, via spliceosome	1525829.	TAS	Process
GO:0048025	negative regulation of mRNA splicing, via spliceosome	10617208.	TAS	Process
GO:0048027	mRNA 5'-UTR binding	16122421.	IDA	Function
GO:0048477	oogenesis	10648226.	TAS	Process
GO:0050821	protein stabilization	16207758.	IDA	Process
GO:1990399	epithelium regeneration	26887495.	IMP	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component
GO:2000035	regulation of stem cell division	26887495.	IMP	Process