EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0264491 (Gene tree)
Gene ID: 42596
Gene Symbol: how
Alias: -
Full Name: held out wings
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 37131 bases
Position: chr3R:22042191-22079321
Accession: FBgn0264491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083576	KH_1	PF00013.29	1.5e-06	1	1
FBpp0099954	KH_1	PF00013.29	1.5e-06	1	1
FBpp0290616	KH_1	PF00013.29	1.7e-06	1	1
FBpp0083575	KH_1	PF00013.29	1.7e-06	1	1
FBpp0290615	KH_1	PF00013.29	1.7e-06	1	1
FBpp0307182	KH_1	PF00013.29	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0301402	-	3103	-	FBpp0290616	404 (aa)	-	E1JIT0
FBtr0301401	-	3884	-	FBpp0290615	405 (aa)	-	O01367
FBtr0084178	-	1759	-	FBpp0083576	375 (aa)	-	O01367-2
FBtr0084177	-	3964	-	FBpp0083575	405 (aa)	-	O01367
FBtr0335195	-	4003	-	FBpp0307182	418 (aa)	-	A0A0B4KHV5
FBtr0100514	-	2181	-	FBpp0099954	380 (aa)	-	O01367-3

Gene Model

Click here to download FBgn0264491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0264491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0264491	how	52	33.333	FBgn0034659	CG4021	53	32.418
FBgn0264491	how	52	34.951	FBgn0034739	CG3927	63	36.667
FBgn0264491	how	55	33.641	FBgn0022986	qkr58E-1	52	34.483
FBgn0264491	how	51	32.692	FBgn0022984	qkr58E-3	53	34.426
FBgn0264491	how	51	31.373	FBgn0034740	nsr	50	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0264491	how	71	59.636	WBGene00006423	asd-2	59	72.680	Caenorhabditis_elegans
FBgn0264491	how	79	53.354	ENSCSAVG00000010716	-	90	56.098	Ciona_savignyi

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	17166919.	IMP	Process
GO:0003727	single-stranded RNA binding	-	IEA	Function
GO:0003729	mRNA binding	9804767.17166919.	IDA	Function
GO:0003730	mRNA 3'-UTR binding	17507411.17728343.	IDA	Function
GO:0005634	nucleus	15492211.	IC	Component
GO:0005634	nucleus	9169854.9804767.22461565.	IDA	Component
GO:0005737	cytoplasm	22461565.	IDA	Component
GO:0006417	regulation of translation	-	IEA	Process
GO:0007155	cell adhesion	9344542.	IMP	Process
GO:0007284	spermatogonial cell division	20362539.	IMP	Process
GO:0007438	oenocyte development	17178401.	IMP	Process
GO:0007475	apposition of dorsal and ventral imaginal disc-derived wing surfaces	9755209.	IMP	Process
GO:0007498	mesoderm development	11486054.	IEP	Process
GO:0007517	muscle organ development	9118803.9169854.	IMP	Process
GO:0007521	muscle cell fate determination	9332381.	IDA	Process
GO:0007525	somatic muscle development	9118803.	IMP	Process
GO:0008016	regulation of heart contraction	9169854.	IMP	Process
GO:0008078	mesodermal cell migration	17728343.	IMP	Process
GO:0008347	glial cell migration	17178401.	IMP	Process
GO:0008366	axon ensheathment	17178401.	IMP	Process
GO:0016203	muscle attachment	9118803.	IMP	Process
GO:0016477	cell migration	9118803.	IMP	Process
GO:0030154	cell differentiation	12361595.	TAS	Process
GO:0030718	germ-line stem cell population maintenance	20362539.	IMP	Process
GO:0045214	sarcomere organization	20220848.	IMP	Process
GO:0045995	regulation of embryonic development	9755209.	IMP	Process