EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0265630 (Gene tree)
Gene ID: 32273
Gene Symbol: sno
Alias: -
Full Name: strawberry notch
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 16176 bases
Position: chrX:13195499-13211674
Accession: FBgn0265630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0309424	ResIII	PF04851.15	3e-08	1	1
FBpp0309425	ResIII	PF04851.15	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0340488	-	5997	-	FBpp0309424	1547 (aa)	-	A8JUV0-3
FBtr0340489	-	6315	-	FBpp0309425	1653 (aa)	-	A8JUV0

Gene Model

Click here to download FBgn0265630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0265630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0265630	sno	69	57.532	FBgn0028887	CG3491	55	64.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0265630	sno	66	67.857	ENSCING00000004320	-	74	62.231	Ciona_intestinalis
FBgn0265630	sno	64	67.647	ENSCSAVG00000004948	-	97	66.962	Ciona_savignyi

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	12230979.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	9171377.	IDA	Component
GO:0005634	nucleus	12419199.	TAS	Component
GO:0007219	Notch signaling pathway	9171377.	IGI	Process
GO:0007219	Notch signaling pathway	9171377.	IMP	Process
GO:0008587	imaginal disc-derived wing margin morphogenesis	9171377.	IMP	Process
GO:0042461	photoreceptor cell development	12230979.	IMP	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	9171377.	IMP	Process
GO:0048190	wing disc dorsal/ventral pattern formation	9171377.	IMP	Process