EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0266284 (Gene tree)
Gene ID: 31097
Gene Symbol: Ns3
Alias: -
Full Name: Nucleostemin 3
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 2377 bases
Position: chrX:1461844-1464220
Accession: FBgn0266284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070284	MMR_HSR1	PF01926.23	8.5e-14	1	1
FBpp0308653	MMR_HSR1	PF01926.23	8.5e-14	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0339578	-	2176	-	FBpp0308653	606 (aa)	-	Q9W590
FBtr0070297	-	2040	-	FBpp0070284	606 (aa)	-	Q9W590

Gene Model

Click here to download FBgn0266284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0266284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0266284	Ns3	67	31.894	FBgn0032882	Ns4	67	31.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0266284	Ns3	91	55.253	ENSG00000041802	LSG1	98	54.237	Homo_sapiens
FBgn0266284	Ns3	99	51.746	ENSAPOG00000009694	lsg1	99	51.905	Acanthochromis_polyacanthus
FBgn0266284	Ns3	89	58.607	ENSAMEG00000009343	LSG1	82	58.607	Ailuropoda_melanoleuca
FBgn0266284	Ns3	98	49.123	ENSACIG00000012406	lsg1	99	50.000	Amphilophus_citrinellus
FBgn0266284	Ns3	99	51.491	ENSAOCG00000016066	lsg1	99	51.506	Amphiprion_ocellaris
FBgn0266284	Ns3	99	51.185	ENSAPEG00000003252	lsg1	99	51.664	Amphiprion_percula
FBgn0266284	Ns3	98	49.840	ENSATEG00000011794	lsg1	99	50.000	Anabas_testudineus
FBgn0266284	Ns3	94	47.840	ENSACAG00000004222	LSG1	99	48.160	Anolis_carolinensis
FBgn0266284	Ns3	91	55.642	ENSANAG00000021153	LSG1	82	57.377	Aotus_nancymaae
FBgn0266284	Ns3	99	48.628	ENSACLG00000000520	lsg1	99	48.323	Astatotilapia_calliptera
FBgn0266284	Ns3	99	48.171	ENSAMXG00000008271	lsg1	99	49.085	Astyanax_mexicanus
FBgn0266284	Ns3	99	46.412	ENSBTAG00000008461	LSG1	85	57.438	Bos_taurus
FBgn0266284	Ns3	93	40.035	WBGene00016907	C53H9.2	98	38.424	Caenorhabditis_elegans
FBgn0266284	Ns3	91	55.642	ENSCJAG00000013962	LSG1	82	57.377	Callithrix_jacchus
FBgn0266284	Ns3	94	49.365	ENSCAFG00000013445	LSG1	99	43.354	Canis_familiaris
FBgn0266284	Ns3	99	47.519	ENSCAFG00020002216	LSG1	99	48.408	Canis_lupus_dingo
FBgn0266284	Ns3	99	46.933	ENSCHIG00000015769	LSG1	99	47.086	Capra_hircus
FBgn0266284	Ns3	93	57.977	ENSTSYG00000001447	LSG1	84	59.836	Carlito_syrichta
FBgn0266284	Ns3	94	47.438	ENSCAPG00000009856	LSG1	99	47.195	Cavia_aperea
FBgn0266284	Ns3	91	55.642	ENSCCAG00000035744	LSG1	82	57.377	Cebus_capucinus
FBgn0266284	Ns3	93	56.420	ENSCATG00000042060	LSG1	84	55.328	Cercocebus_atys
FBgn0266284	Ns3	93	56.420	ENSCSAG00000008796	LSG1	77	58.197	Chlorocebus_sabaeus
FBgn0266284	Ns3	99	45.753	ENSCPBG00000015941	LSG1	68	58.264	Chrysemys_picta_bellii
FBgn0266284	Ns3	84	51.081	ENSCING00000007079	-	100	50.884	Ciona_intestinalis
FBgn0266284	Ns3	92	47.811	ENSCSAVG00000002514	-	100	51.367	Ciona_savignyi
FBgn0266284	Ns3	91	57.851	ENSCANG00000030709	LSG1	84	57.851	Colobus_angolensis_palliatus
FBgn0266284	Ns3	99	48.402	ENSCGRG00001019846	Lsg1	99	48.527	Cricetulus_griseus_chok1gshd
FBgn0266284	Ns3	99	48.402	ENSCGRG00000014617	Lsg1	99	48.397	Cricetulus_griseus_crigri
FBgn0266284	Ns3	98	49.357	ENSCSEG00000008522	lsg1	99	49.528	Cynoglossus_semilaevis
FBgn0266284	Ns3	95	50.168	ENSCVAG00000002484	lsg1	99	50.000	Cyprinodon_variegatus
FBgn0266284	Ns3	99	50.000	ENSDARG00000015352	lsg1	99	49.768	Danio_rerio
FBgn0266284	Ns3	99	47.130	ENSDNOG00000006224	LSG1	84	59.091	Dasypus_novemcinctus
FBgn0266284	Ns3	87	56.579	ENSETEG00000003888	LSG1	72	65.625	Echinops_telfairi
FBgn0266284	Ns3	89	45.238	ENSEBUG00000003119	lsg1	86	44.949	Eptatretus_burgeri
FBgn0266284	Ns3	93	57.198	ENSEASG00005000678	LSG1	84	58.678	Equus_asinus_asinus
FBgn0266284	Ns3	93	56.078	ENSECAG00000017659	LSG1	84	58.264	Equus_caballus
FBgn0266284	Ns3	54	46.053	ENSEEUG00000015217	LSG1	57	45.932	Erinaceus_europaeus
FBgn0266284	Ns3	99	48.571	ENSELUG00000023973	lsg1	99	48.571	Esox_lucius
FBgn0266284	Ns3	91	57.588	ENSFCAG00000024957	LSG1	82	59.426	Felis_catus
FBgn0266284	Ns3	83	56.585	ENSFALG00000007210	LSG1	76	58.854	Ficedula_albicollis
FBgn0266284	Ns3	99	48.302	ENSFDAG00000017373	LSG1	99	48.223	Fukomys_damarensis
FBgn0266284	Ns3	97	49.206	ENSFHEG00000003680	lsg1	99	49.457	Fundulus_heteroclitus
FBgn0266284	Ns3	92	57.252	ENSGMOG00000015834	lsg1	86	61.290	Gadus_morhua
FBgn0266284	Ns3	91	52.157	ENSGALG00000007058	LSG1	71	53.719	Gallus_gallus
FBgn0266284	Ns3	95	50.333	ENSGAFG00000015831	lsg1	99	50.079	Gambusia_affinis
FBgn0266284	Ns3	98	49.365	ENSGACG00000009323	lsg1	99	48.834	Gasterosteus_aculeatus
FBgn0266284	Ns3	91	55.642	ENSGGOG00000000520	LSG1	82	57.377	Gorilla_gorilla
FBgn0266284	Ns3	99	49.228	ENSHBUG00000005659	lsg1	99	49.228	Haplochromis_burtoni
FBgn0266284	Ns3	99	48.826	ENSHGLG00000017390	LSG1	99	49.452	Heterocephalus_glaber_female
FBgn0266284	Ns3	99	48.826	ENSHGLG00100018587	LSG1	99	49.452	Heterocephalus_glaber_male
FBgn0266284	Ns3	97	48.967	ENSHCOG00000016848	lsg1	99	49.147	Hippocampus_comes
FBgn0266284	Ns3	99	48.899	ENSIPUG00000008631	lsg1	99	49.369	Ictalurus_punctatus
FBgn0266284	Ns3	64	56.250	ENSSTOG00000010234	LSG1	71	64.179	Ictidomys_tridecemlineatus
FBgn0266284	Ns3	99	48.447	ENSJJAG00000015513	Lsg1	99	48.913	Jaculus_jaculus
FBgn0266284	Ns3	98	49.510	ENSKMAG00000009681	lsg1	99	49.128	Kryptolebias_marmoratus
FBgn0266284	Ns3	98	50.575	ENSLBEG00000024261	lsg1	99	50.162	Labrus_bergylta
FBgn0266284	Ns3	91	57.874	ENSLACG00000013399	LSG1	81	59.504	Latimeria_chalumnae
FBgn0266284	Ns3	98	47.492	ENSLOCG00000004918	lsg1	99	47.626	Lepisosteus_oculatus
FBgn0266284	Ns3	99	48.706	ENSLAFG00000012919	-	99	48.338	Loxodonta_africana
FBgn0266284	Ns3	93	56.420	ENSMFAG00000039903	LSG1	84	55.328	Macaca_fascicularis
FBgn0266284	Ns3	93	56.420	ENSMMUG00000010708	LSG1	84	58.197	Macaca_mulatta
FBgn0266284	Ns3	93	56.420	ENSMNEG00000031538	LSG1	84	54.918	Macaca_nemestrina
FBgn0266284	Ns3	93	56.420	ENSMLEG00000041184	LSG1	84	58.197	Mandrillus_leucophaeus
FBgn0266284	Ns3	99	50.158	ENSMAMG00000000470	lsg1	99	49.533	Mastacembelus_armatus
FBgn0266284	Ns3	99	49.383	ENSMZEG00005017865	lsg1	99	49.383	Maylandia_zebra
FBgn0266284	Ns3	79	57.778	ENSMGAG00000007050	LSG1	79	60.479	Meleagris_gallopavo
FBgn0266284	Ns3	99	46.596	ENSMICG00000049087	LSG1	99	46.899	Microcebus_murinus
FBgn0266284	Ns3	99	47.328	ENSMOCG00000022136	Lsg1	99	46.870	Microtus_ochrogaster
FBgn0266284	Ns3	98	50.751	ENSMMOG00000008884	lsg1	99	50.980	Mola_mola
FBgn0266284	Ns3	98	41.284	ENSMODG00000019828	LSG1	98	41.348	Monodelphis_domestica
FBgn0266284	Ns3	99	48.165	MGP_CAROLIEiJ_G0020648	Lsg1	99	48.694	Mus_caroli
FBgn0266284	Ns3	99	48.471	ENSMUSG00000022538	Lsg1	99	48.694	Mus_musculus
FBgn0266284	Ns3	93	57.371	MGP_PahariEiJ_G0016352	Lsg1	99	48.476	Mus_pahari
FBgn0266284	Ns3	99	48.165	MGP_SPRETEiJ_G0021544	Lsg1	99	48.318	Mus_spretus
FBgn0266284	Ns3	99	47.305	ENSMPUG00000003734	LSG1	82	59.426	Mustela_putorius_furo
FBgn0266284	Ns3	99	47.734	ENSMLUG00000012548	LSG1	99	48.115	Myotis_lucifugus
FBgn0266284	Ns3	99	47.612	ENSNGAG00000021872	Lsg1	99	47.158	Nannospalax_galili
FBgn0266284	Ns3	93	56.031	ENSNLEG00000008293	LSG1	84	57.787	Nomascus_leucogenys
FBgn0266284	Ns3	65	54.639	ENSMEUG00000009041	-	74	54.639	Notamacropus_eugenii
FBgn0266284	Ns3	99	48.851	ENSONIG00000002635	lsg1	99	49.617	Oreochromis_niloticus
FBgn0266284	Ns3	94	48.220	ENSOANG00000012742	LSG1	99	48.058	Ornithorhynchus_anatinus
FBgn0266284	Ns3	94	56.654	ENSOCUG00000004817	LSG1	85	59.836	Oryctolagus_cuniculus
FBgn0266284	Ns3	98	50.651	ENSORLG00000007695	lsg1	99	50.718	Oryzias_latipes
FBgn0266284	Ns3	98	50.567	ENSORLG00020016286	lsg1	99	50.794	Oryzias_latipes_hni
FBgn0266284	Ns3	98	50.909	ENSORLG00015012025	lsg1	99	51.456	Oryzias_latipes_hsok
FBgn0266284	Ns3	98	49.169	ENSOMEG00000022379	lsg1	99	49.199	Oryzias_melastigma
FBgn0266284	Ns3	94	56.705	ENSOGAG00000003475	LSG1	84	59.426	Otolemur_garnettii
FBgn0266284	Ns3	99	46.049	ENSOARG00000020403	LSG1	99	46.119	Ovis_aries
FBgn0266284	Ns3	91	56.031	ENSPPAG00000029271	LSG1	82	57.377	Pan_paniscus
FBgn0266284	Ns3	91	57.588	ENSPPRG00000010281	LSG1	82	59.426	Panthera_pardus
FBgn0266284	Ns3	91	57.588	ENSPTIG00000010789	LSG1	83	59.426	Panthera_tigris_altaica
FBgn0266284	Ns3	99	46.235	ENSPTRG00000015760	LSG1	82	57.377	Pan_troglodytes
FBgn0266284	Ns3	93	56.809	ENSPANG00000018249	LSG1	84	55.738	Papio_anubis
FBgn0266284	Ns3	95	50.408	ENSPKIG00000002895	lsg1	99	50.078	Paramormyrops_kingsleyae
FBgn0266284	Ns3	94	45.268	ENSPSIG00000009821	LSG1	99	44.795	Pelodiscus_sinensis
FBgn0266284	Ns3	94	50.083	ENSPMGG00000000931	lsg1	99	50.083	Periophthalmus_magnuspinnatus
FBgn0266284	Ns3	99	48.176	ENSPEMG00000012082	-	99	47.713	Peromyscus_maniculatus_bairdii
FBgn0266284	Ns3	99	46.786	ENSPMAG00000007451	lsg1	82	60.744	Petromyzon_marinus
FBgn0266284	Ns3	88	58.403	ENSPCIG00000013890	LSG1	82	48.614	Phascolarctos_cinereus
FBgn0266284	Ns3	95	49.755	ENSPFOG00000021882	lsg1	99	49.610	Poecilia_formosa
FBgn0266284	Ns3	95	48.936	ENSPLAG00000019536	lsg1	99	48.830	Poecilia_latipinna
FBgn0266284	Ns3	95	48.940	ENSPMEG00000017281	lsg1	99	48.834	Poecilia_mexicana
FBgn0266284	Ns3	95	41.396	ENSPREG00000006048	lsg1	99	41.577	Poecilia_reticulata
FBgn0266284	Ns3	90	48.675	ENSPPYG00000014425	LSG1	80	57.377	Pongo_abelii
FBgn0266284	Ns3	76	59.821	ENSPCAG00000005511	LSG1	69	63.636	Procavia_capensis
FBgn0266284	Ns3	99	46.386	ENSPCOG00000012360	LSG1	99	46.917	Propithecus_coquereli
FBgn0266284	Ns3	99	48.628	ENSPNYG00000021994	lsg1	99	48.323	Pundamilia_nyererei
FBgn0266284	Ns3	99	48.466	ENSPNAG00000015533	lsg1	99	48.382	Pygocentrus_nattereri
FBgn0266284	Ns3	91	59.016	ENSRNOG00000001727	Lsg1	85	59.016	Rattus_norvegicus
FBgn0266284	Ns3	93	56.078	ENSRBIG00000029053	LSG1	84	57.851	Rhinopithecus_bieti
FBgn0266284	Ns3	93	56.078	ENSRROG00000037702	LSG1	84	57.851	Rhinopithecus_roxellana
FBgn0266284	Ns3	81	43.625	YGL099W	LSG1	74	43.762	Saccharomyces_cerevisiae
FBgn0266284	Ns3	91	55.642	ENSSBOG00000034938	LSG1	82	57.377	Saimiri_boliviensis_boliviensis
FBgn0266284	Ns3	65	68.750	ENSSHAG00000003487	LSG1	76	68.750	Sarcophilus_harrisii
FBgn0266284	Ns3	98	49.842	ENSSFOG00015008955	lsg1	99	50.000	Scleropages_formosus
FBgn0266284	Ns3	98	49.134	ENSSDUG00000004622	lsg1	99	49.304	Seriola_dumerili
FBgn0266284	Ns3	98	49.275	ENSSLDG00000010869	lsg1	99	49.369	Seriola_lalandi_dorsalis
FBgn0266284	Ns3	70	59.130	ENSSARG00000012981	LSG1	65	59.130	Sorex_araneus
FBgn0266284	Ns3	99	46.951	ENSSPUG00000016347	LSG1	83	58.848	Sphenodon_punctatus
FBgn0266284	Ns3	99	50.720	ENSSPAG00000005508	lsg1	99	51.050	Stegastes_partitus
FBgn0266284	Ns3	99	45.455	ENSSSCG00000011827	LSG1	99	45.455	Sus_scrofa
FBgn0266284	Ns3	79	56.667	ENSTGUG00000009068	LSG1	79	58.683	Taeniopygia_guttata
FBgn0266284	Ns3	97	46.935	ENSTRUG00000017380	lsg1	99	47.567	Takifugu_rubripes
FBgn0266284	Ns3	97	50.322	ENSTNIG00000015570	lsg1	99	50.391	Tetraodon_nigroviridis
FBgn0266284	Ns3	81	51.866	ENSTTRG00000000559	LSG1	67	61.929	Tursiops_truncatus
FBgn0266284	Ns3	89	58.607	ENSUAMG00000012454	LSG1	82	58.607	Ursus_americanus
FBgn0266284	Ns3	89	58.607	ENSUMAG00000000855	LSG1	82	58.607	Ursus_maritimus
FBgn0266284	Ns3	94	43.790	ENSVPAG00000012400	LSG1	81	52.885	Vicugna_pacos
FBgn0266284	Ns3	94	48.408	ENSVVUG00000008956	LSG1	79	65.238	Vulpes_vulpes
FBgn0266284	Ns3	99	48.397	ENSXETG00000003451	lsg1	100	47.826	Xenopus_tropicalis
FBgn0266284	Ns3	95	49.671	ENSXCOG00000003239	lsg1	99	49.216	Xiphophorus_couchianus
FBgn0266284	Ns3	95	49.667	ENSXMAG00000005536	lsg1	99	49.524	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000054	ribosomal subunit export from nucleus	23436180.	IMP	Process
GO:0003924	GTPase activity	23436180.	IDA	Function
GO:0005525	GTP binding	-	ISS	Function
GO:0005737	cytoplasm	18628395.23436180.	IDA	Component
GO:0005783	endoplasmic reticulum	-	ISS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0015030	Cajal body	-	ISS	Component
GO:0046626	regulation of insulin receptor signaling pathway	18628395.	IMP	Process
GO:0051168	nuclear export	-	ISS	Process