EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0267727 (Gene tree)
Gene ID: 34338
Gene Symbol: Pen
Alias: -
Full Name: Pendulin
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3196
Position: chr2L: 10056900-10060095
Accession: FBgn0267727
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0079937	-	2577	-	FBpp0079527	522 (aa)	-	P52295

Gene Model

Click here to download FBgn0267727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0267727's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0267727	Pen	99	45.174	WBGene00002074	ima-3	99	45.174	Caenorhabditis_elegans
FBgn0267727	Pen	100	44.551	FBgn0027338	Kap-alpha3	100	44.656	Drosophila_melanogaster
FBgn0267727	Pen	99	47.850	ENSG00000025800	KPNA6	99	47.850	Homo_sapiens
FBgn0267727	Pen	96	46.535	ENSG00000102753	KPNA3	99	43.478	Homo_sapiens
FBgn0267727	Pen	98	44.361	ENSG00000114030	KPNA1	98	46.417	Homo_sapiens
FBgn0267727	Pen	96	41.779	YNL189W	SRP1	94	41.779	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	7790350.	IDA	Component
GO:0005737	cytoplasm	7790350.	IDA	Component
GO:0006607	NLS-bearing protein import into nucleus	22359651.	IMP	Process
GO:0007291	sperm individualization	12019231.	IMP	Process
GO:0007301	female germline ring canal formation	12435357.	IMP	Process
GO:0008565	protein transporter activity	-	IEA	Function
GO:0042332	gravitaxis	12042820.	IMP	Process
GO:0048542	lymph gland development	8224829.	IMP	Process
GO:0061608	nuclear import signal receptor activity	-	IEA	Function