EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0283442 (Gene tree)
Gene ID: 26067080
Gene Symbol: vas
Alias: -
Full Name: vasa
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 12656 bases
Position: chr2L:15061656-15074311
Accession: FBgn0283442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0401445	ResIII	PF04851.15	1.9e-06	1	1
FBpp0401446	ResIII	PF04851.15	1.9e-06	1	1
FBpp0401447	ResIII	PF04851.15	1.9e-06	1	1
FBpp0401445	DEAD	PF00270.29	3e-50	1	1
FBpp0401446	DEAD	PF00270.29	3e-50	1	1
FBpp0401447	DEAD	PF00270.29	3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0445187	-	2195	-	FBpp0401447	661 (aa)	-	P09052
FBtr0445186	-	2285	-	FBpp0401446	661 (aa)	-	P09052
FBtr0445185	-	2241	-	FBpp0401445	661 (aa)	-	P09052

Gene Model

Click here to download FBgn0283442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0283442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0283442	vas	53	33.523	FBgn0032919	CG9253	68	33.523
FBgn0283442	vas	62	50.583	FBgn0263231	bel	57	48.812
FBgn0283442	vas	55	32.973	FBgn0037573	CG7483	90	32.973
FBgn0283442	vas	59	33.915	FBgn0036754	CG5589	66	33.915
FBgn0283442	vas	51	31.594	FBgn0266581	pit	50	31.594
FBgn0283442	vas	57	40.260	FBgn0003261	Rm62	71	39.277
FBgn0283442	vas	57	39.853	FBgn0032690	CG10333	50	39.853
FBgn0283442	vas	52	30.252	FBgn0024804	Dbp80	78	30.532
FBgn0283442	vas	51	30.178	FBgn0004419	me31B	71	30.357
FBgn0283442	vas	60	40.547	FBgn0035720	CG10077	74	37.845
FBgn0283442	vas	52	32.609	FBgn0037561	CG9630	59	32.440
FBgn0283442	vas	54	31.536	FBgn0086130	Dbp21E2	69	31.536
FBgn0283442	vas	58	41.624	FBgn0037549	CG7878	61	40.323
FBgn0283442	vas	53	33.154	FBgn0010220	Dbp45A	69	32.979
FBgn0283442	vas	50	47.059	FBgn0015075	Ddx1	53	46.296
FBgn0283442	vas	59	38.035	FBgn0015331	abs	64	37.656
FBgn0283442	vas	56	32.275	FBgn0001942	eIF4A	91	32.275
FBgn0283442	vas	53	30.618	FBgn0014189	Hel25E	82	30.618

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0283442	vas	71	50.820	ENSG00000152670	DDX4	83	51.875	Homo_sapiens
FBgn0283442	vas	51	52.047	ENSAPOG00000021394	ddx4	100	47.619	Acanthochromis_polyacanthus
FBgn0283442	vas	71	51.521	ENSAMEG00000013960	DDX4	66	52.165	Ailuropoda_melanoleuca
FBgn0283442	vas	57	53.634	ENSACIG00000017623	ddx4	100	53.634	Amphilophus_citrinellus
FBgn0283442	vas	55	54.233	ENSAPEG00000008490	ddx4	94	54.233	Amphiprion_percula
FBgn0283442	vas	55	54.545	ENSATEG00000011704	ddx4	100	52.405	Anabas_testudineus
FBgn0283442	vas	61	54.455	ENSAPLG00000011662	DDX4	96	53.901	Anas_platyrhynchos
FBgn0283442	vas	71	51.025	ENSANAG00000029060	DDX4	69	51.667	Aotus_nancymaae
FBgn0283442	vas	68	52.700	ENSACLG00000007422	ddx4	76	53.289	Astatotilapia_calliptera
FBgn0283442	vas	65	52.392	ENSAMXG00000010288	ddx4	65	53.630	Astyanax_mexicanus
FBgn0283442	vas	71	51.521	ENSBTAG00000008871	DDX4	71	52.165	Bos_taurus
FBgn0283442	vas	64	41.871	WBGene00001600	glh-3	62	41.871	Caenorhabditis_elegans
FBgn0283442	vas	66	44.252	WBGene00001598	glh-1	60	43.897	Caenorhabditis_elegans
FBgn0283442	vas	71	50.410	ENSCJAG00000001951	DDX4	83	51.042	Callithrix_jacchus
FBgn0283442	vas	71	51.318	ENSCAFG00000006875	DDX4	66	51.959	Canis_familiaris
FBgn0283442	vas	67	52.361	ENSCAFG00020024295	DDX4	73	51.959	Canis_lupus_dingo
FBgn0283442	vas	71	51.521	ENSCHIG00000015567	DDX4	68	52.165	Capra_hircus
FBgn0283442	vas	90	46.067	ENSTSYG00000011848	DDX4	84	52.192	Carlito_syrichta
FBgn0283442	vas	56	44.216	ENSCPOG00000004327	DDX4	59	44.216	Cavia_porcellus
FBgn0283442	vas	92	43.857	ENSCCAG00000028725	DDX4	70	52.083	Cebus_capucinus
FBgn0283442	vas	71	50.820	ENSCATG00000044303	DDX4	83	51.875	Cercocebus_atys
FBgn0283442	vas	71	51.016	ENSCLAG00000005386	DDX4	69	51.653	Chinchilla_lanigera
FBgn0283442	vas	67	51.717	ENSCSAG00000016336	DDX4	66	51.340	Chlorocebus_sabaeus
FBgn0283442	vas	63	52.198	ENSCHOG00000000200	DDX4	66	44.792	Choloepus_hoffmanni
FBgn0283442	vas	75	49.425	ENSCPBG00000026547	DDX4	82	51.351	Chrysemys_picta_bellii
FBgn0283442	vas	66	54.788	ENSCING00000001412	-	75	55.875	Ciona_intestinalis
FBgn0283442	vas	66	53.795	ENSCSAVG00000004304	-	72	53.712	Ciona_savignyi
FBgn0283442	vas	90	42.835	ENSCANG00000003129	DDX4	82	48.125	Colobus_angolensis_palliatus
FBgn0283442	vas	71	50.407	ENSCGRG00001014961	Ddx4	69	51.033	Cricetulus_griseus_chok1gshd
FBgn0283442	vas	71	50.407	ENSCGRG00000001251	Ddx4	69	51.033	Cricetulus_griseus_crigri
FBgn0283442	vas	63	51.765	ENSCSEG00000006039	ddx4	71	48.247	Cynoglossus_semilaevis
FBgn0283442	vas	66	53.452	ENSDARG00000014373	ddx4	70	51.139	Danio_rerio
FBgn0283442	vas	67	50.214	ENSDNOG00000011658	DDX4	70	49.897	Dasypus_novemcinctus
FBgn0283442	vas	69	52.754	ENSDORG00000012201	Ddx4	65	53.233	Dipodomys_ordii
FBgn0283442	vas	59	48.775	ENSEBUG00000003290	-	81	48.775	Eptatretus_burgeri
FBgn0283442	vas	92	45.794	ENSEASG00005012143	DDX4	75	52.083	Equus_asinus_asinus
FBgn0283442	vas	99	44.046	ENSECAG00000023616	DDX4	75	51.959	Equus_caballus
FBgn0283442	vas	56	56.117	ENSEEUG00000012462	DDX4	52	56.117	Erinaceus_europaeus
FBgn0283442	vas	68	52.802	ENSELUG00000017328	ddx4	66	55.269	Esox_lucius
FBgn0283442	vas	71	51.230	ENSFCAG00000012560	DDX4	84	51.875	Felis_catus
FBgn0283442	vas	70	48.305	ENSFALG00000010910	DDX4	63	47.899	Ficedula_albicollis
FBgn0283442	vas	71	51.423	ENSFDAG00000003703	DDX4	69	52.066	Fukomys_damarensis
FBgn0283442	vas	69	51.502	ENSFHEG00000019935	ddx4	73	52.070	Fundulus_heteroclitus
FBgn0283442	vas	94	42.410	ENSGALG00000014713	DDX4	64	52.225	Gallus_gallus
FBgn0283442	vas	69	53.017	ENSGAFG00000016509	ddx4	75	51.346	Gambusia_affinis
FBgn0283442	vas	73	47.791	ENSGACG00000015323	ddx4	94	51.528	Gasterosteus_aculeatus
FBgn0283442	vas	71	50.820	ENSGGOG00000002439	DDX4	83	51.875	Gorilla_gorilla
FBgn0283442	vas	68	52.700	ENSHBUG00000001897	ddx4	77	53.070	Haplochromis_burtoni
FBgn0283442	vas	71	47.358	ENSHGLG00000003594	DDX4	67	47.934	Heterocephalus_glaber_female
FBgn0283442	vas	70	51.163	ENSHCOG00000018337	ddx4	77	52.298	Hippocampus_comes
FBgn0283442	vas	68	51.496	ENSIPUG00000001845	ddx4	79	51.042	Ictalurus_punctatus
FBgn0283442	vas	71	51.012	ENSSTOG00000021044	DDX4	69	51.646	Ictidomys_tridecemlineatus
FBgn0283442	vas	71	50.813	ENSJJAG00000015867	Ddx4	69	51.446	Jaculus_jaculus
FBgn0283442	vas	69	53.648	ENSKMAG00000012439	ddx4	76	52.147	Kryptolebias_marmoratus
FBgn0283442	vas	68	53.407	ENSLBEG00000019504	ddx4	75	51.553	Labrus_bergylta
FBgn0283442	vas	67	51.528	ENSLOCG00000010887	ddx4	99	51.153	Lepisosteus_oculatus
FBgn0283442	vas	67	52.575	ENSLAFG00000005900	DDX4	69	52.165	Loxodonta_africana
FBgn0283442	vas	71	50.820	ENSMFAG00000040186	DDX4	83	51.875	Macaca_fascicularis
FBgn0283442	vas	71	50.820	ENSMMUG00000017386	DDX4	83	51.875	Macaca_mulatta
FBgn0283442	vas	71	50.820	ENSMNEG00000033343	DDX4	83	51.875	Macaca_nemestrina
FBgn0283442	vas	68	49.134	ENSMLEG00000038233	DDX4	81	49.780	Mandrillus_leucophaeus
FBgn0283442	vas	54	54.247	ENSMAMG00000003574	ddx4	93	54.247	Mastacembelus_armatus
FBgn0283442	vas	68	52.700	ENSMZEG00005019116	ddx4	79	53.289	Maylandia_zebra
FBgn0283442	vas	67	46.237	ENSMAUG00000019873	Ddx4	70	46.074	Mesocricetus_auratus
FBgn0283442	vas	56	45.078	ENSMICG00000028132	-	64	45.337	Microcebus_murinus
FBgn0283442	vas	71	51.943	ENSMICG00000008994	-	84	52.599	Microcebus_murinus
FBgn0283442	vas	71	50.813	ENSMOCG00000013250	Ddx4	69	51.446	Microtus_ochrogaster
FBgn0283442	vas	75	46.314	ENSMMOG00000004689	ddx4	85	49.064	Mola_mola
FBgn0283442	vas	67	52.903	ENSMODG00000019511	DDX4	67	52.479	Monodelphis_domestica
FBgn0283442	vas	71	50.507	MGP_CAROLIEiJ_G0018893	Ddx4	61	55.035	Mus_caroli
FBgn0283442	vas	67	51.073	ENSMUSG00000021758	Ddx4	61	54.567	Mus_musculus
FBgn0283442	vas	71	50.610	MGP_PahariEiJ_G0015964	Ddx4	61	55.269	Mus_pahari
FBgn0283442	vas	71	50.507	MGP_SPRETEiJ_G0019772	Ddx4	61	55.035	Mus_spretus
FBgn0283442	vas	71	51.215	ENSMPUG00000007596	DDX4	66	51.852	Mustela_putorius_furo
FBgn0283442	vas	70	52.577	ENSMLUG00000001189	DDX4	66	52.577	Myotis_lucifugus
FBgn0283442	vas	90	43.975	ENSNGAG00000013259	Ddx4	67	51.812	Nannospalax_galili
FBgn0283442	vas	70	50.304	ENSNBRG00000014442	ddx4	100	47.859	Neolamprologus_brichardi
FBgn0283442	vas	90	45.806	ENSNLEG00000001662	DDX4	83	52.083	Nomascus_leucogenys
FBgn0283442	vas	71	50.816	ENSODEG00000016951	-	70	51.452	Octodon_degus
FBgn0283442	vas	71	49.592	ENSODEG00000003839	-	73	50.207	Octodon_degus
FBgn0283442	vas	69	51.471	ENSONIG00000012063	ddx4	99	51.667	Oreochromis_niloticus
FBgn0283442	vas	54	51.892	ENSOANG00000004888	-	94	51.892	Ornithorhynchus_anatinus
FBgn0283442	vas	69	52.119	ENSOCUG00000008597	DDX4	63	52.802	Oryctolagus_cuniculus
FBgn0283442	vas	79	48.037	ENSORLG00000020672	ddx4	82	47.850	Oryzias_latipes
FBgn0283442	vas	79	47.850	ENSORLG00020014206	ddx4	82	47.850	Oryzias_latipes_hni
FBgn0283442	vas	70	51.572	ENSORLG00015016600	ddx4	82	48.037	Oryzias_latipes_hsok
FBgn0283442	vas	68	53.362	ENSOMEG00000010651	ddx4	76	53.377	Oryzias_melastigma
FBgn0283442	vas	90	45.095	ENSOGAG00000007588	DDX4	66	52.292	Otolemur_garnettii
FBgn0283442	vas	71	51.521	ENSOARG00000007644	DDX4	66	52.165	Ovis_aries
FBgn0283442	vas	71	50.820	ENSPPAG00000033915	DDX4	83	51.875	Pan_paniscus
FBgn0283442	vas	71	50.615	ENSPPRG00000011417	DDX4	69	51.250	Panthera_pardus
FBgn0283442	vas	71	50.410	ENSPTIG00000007748	DDX4	82	49.791	Panthera_tigris_altaica
FBgn0283442	vas	71	50.820	ENSPTRG00000016884	DDX4	83	51.875	Pan_troglodytes
FBgn0283442	vas	71	50.820	ENSPANG00000010945	DDX4	83	51.875	Papio_anubis
FBgn0283442	vas	63	54.953	ENSPSIG00000017179	DDX4	68	55.769	Pelodiscus_sinensis
FBgn0283442	vas	57	48.849	ENSPMGG00000015642	ddx4	99	48.849	Periophthalmus_magnuspinnatus
FBgn0283442	vas	71	51.423	ENSPEMG00000010086	Ddx4	69	52.066	Peromyscus_maniculatus_bairdii
FBgn0283442	vas	67	52.473	ENSPCIG00000024758	DDX4	74	51.860	Phascolarctos_cinereus
FBgn0283442	vas	69	52.586	ENSPFOG00000018842	ddx4	75	50.932	Poecilia_formosa
FBgn0283442	vas	69	52.586	ENSPLAG00000020726	ddx4	75	50.932	Poecilia_latipinna
FBgn0283442	vas	69	52.586	ENSPMEG00000002976	ddx4	78	50.932	Poecilia_mexicana
FBgn0283442	vas	69	52.586	ENSPREG00000017840	ddx4	78	50.932	Poecilia_reticulata
FBgn0283442	vas	71	50.820	ENSPPYG00000015472	DDX4	66	51.875	Pongo_abelii
FBgn0283442	vas	56	57.600	ENSPCAG00000002675	DDX4	55	56.853	Procavia_capensis
FBgn0283442	vas	71	51.230	ENSPVAG00000002448	DDX4	61	55.504	Pteropus_vampyrus
FBgn0283442	vas	67	53.289	ENSPNYG00000022212	ddx4	79	53.289	Pundamilia_nyererei
FBgn0283442	vas	59	55.890	ENSPNAG00000003686	ddx4	66	54.545	Pygocentrus_nattereri
FBgn0283442	vas	68	52.268	ENSRNOG00000026686	Ddx4	60	55.035	Rattus_norvegicus
FBgn0283442	vas	71	50.615	ENSRBIG00000028795	DDX4	83	51.250	Rhinopithecus_bieti
FBgn0283442	vas	71	50.615	ENSRROG00000045392	DDX4	83	51.250	Rhinopithecus_roxellana
FBgn0283442	vas	63	47.248	YPL119C	DBP1	76	45.532	Saccharomyces_cerevisiae
FBgn0283442	vas	71	50.924	ENSSBOG00000035231	DDX4	69	51.566	Saimiri_boliviensis_boliviensis
FBgn0283442	vas	67	52.903	ENSSHAG00000009132	DDX4	68	52.479	Sarcophilus_harrisii
FBgn0283442	vas	64	54.378	ENSSFOG00015006531	ddx4	70	52.980	Scleropages_formosus
FBgn0283442	vas	68	54.048	ENSSDUG00000022015	ddx4	69	55.275	Seriola_dumerili
FBgn0283442	vas	54	56.011	ENSSLDG00000015312	ddx4	93	56.011	Seriola_lalandi_dorsalis
FBgn0283442	vas	61	54.137	ENSSARG00000004206	DDX4	58	54.137	Sorex_araneus
FBgn0283442	vas	67	53.642	ENSSPUG00000007260	DDX4	78	53.642	Sphenodon_punctatus
FBgn0283442	vas	57	51.378	ENSSPAG00000014307	ddx4	100	51.378	Stegastes_partitus
FBgn0283442	vas	71	51.318	ENSSSCG00000016913	DDX4	66	51.959	Sus_scrofa
FBgn0283442	vas	63	51.054	ENSTGUG00000002548	DDX4	97	51.054	Taeniopygia_guttata
FBgn0283442	vas	70	46.875	ENSTNIG00000014474	ddx4	85	46.170	Tetraodon_nigroviridis
FBgn0283442	vas	57	49.515	ENSTBEG00000003569	DDX4	52	52.632	Tupaia_belangeri
FBgn0283442	vas	67	52.575	ENSUAMG00000023028	DDX4	73	52.165	Ursus_americanus
FBgn0283442	vas	67	52.575	ENSUMAG00000009291	DDX4	73	52.165	Ursus_maritimus
FBgn0283442	vas	67	53.043	ENSVPAG00000009491	DDX4	66	53.027	Vicugna_pacos
FBgn0283442	vas	71	51.318	ENSVVUG00000021369	DDX4	69	51.959	Vulpes_vulpes
FBgn0283442	vas	89	45.114	ENSXETG00000030832	DDX4	76	50.104	Xenopus_tropicalis
FBgn0283442	vas	69	53.017	ENSXMAG00000009677	ddx4	79	51.346	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	16630817.	IDA	Function
GO:0003724	RNA helicase activity	9642168.10449356.11131516.	TAS	Function
GO:0003730	mRNA 3'-UTR binding	19952109.	IDA	Function
GO:0004004	ATP-dependent RNA helicase activity	8026330.	IDA	Function
GO:0005515	protein binding	10678180.12479811.14588248.16949822.17189197.20123973.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	2384213.12479811.30260314.	IDA	Component
GO:0006417	regulation of translation	9642168.	TAS	Process
GO:0007076	mitotic chromosome condensation	21185189.	IMP	Process
GO:0007293	germarium-derived egg chamber formation	16630817.	IMP	Process
GO:0007314	oocyte anterior/posterior axis specification	10878576.	NAS	Process
GO:0007315	pole plasm assembly	2151612.	IMP	Process
GO:0007315	pole plasm assembly	8804312.8970731.11131516.	TAS	Process
GO:0007316	pole plasm RNA localization	2151612.	IMP	Process
GO:0008104	protein localization	20123973.	IMP	Process
GO:0008298	intracellular mRNA localization	9642168.9988212.	TAS	Process
GO:0030717	oocyte karyosome formation	11700288.	NAS	Process
GO:0036464	cytoplasmic ribonucleoprotein granule	24910301.	IDA	Component
GO:0043073	germ cell nucleus	30260314.	IDA	Component
GO:0043186	P granule	8804312.20123973.26295961.30260314.	IDA	Component
GO:0043186	P granule	2151612.8970731.11131516.	TAS	Component
GO:0045170	spectrosome	22024320.	IDA	Component
GO:0045495	pole plasm	20123973.	IDA	Component
GO:0045727	positive regulation of translation	19952109.	IMP	Process
GO:0045727	positive regulation of translation	11131516.	TAS	Process
GO:0046011	regulation of oskar mRNA translation	10449356.	TAS	Process
GO:0046012	positive regulation of oskar mRNA translation	11131516.12655640.	NAS	Process
GO:0046843	dorsal appendage formation	1783295.	HMP	Process
GO:0048471	perinuclear region of cytoplasm	2384213.24910301.	IDA	Component
GO:0048477	oogenesis	1783295.	HMP	Process
GO:0048477	oogenesis	10449356.	TAS	Process
GO:0061803	posterior cell cortex	30260314.	IDA	Component