EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0284256 (Gene tree)
Gene ID: 35100
Gene Symbol: bsf
Alias: -
Full Name: bicoid stability factor
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 5071 bases
Position: chr2L:18449517-18454587
Accession: FBgn0284256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080637	PPR	PF01535.20	3.9e-19	1	3
FBpp0080637	PPR	PF01535.20	3.9e-19	2	3
FBpp0080637	PPR	PF01535.20	3.9e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0081087	-	4457	-	FBpp0080637	1412 (aa)	-	Q95NR4

Gene Model

Click here to download FBgn0284256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0284256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0284256	bsf	66	42.723	ENSG00000138095	LRPPRC	87	45.714	Homo_sapiens
FBgn0284256	bsf	85	30.403	ENSAPLG00000008902	LRPPRC	90	30.323	Anas_platyrhynchos
FBgn0284256	bsf	68	33.949	ENSBTAG00000016368	LRPPRC	67	33.916	Bos_taurus
FBgn0284256	bsf	78	31.979	ENSCAFG00000002527	LRPPRC	78	32.127	Canis_familiaris
FBgn0284256	bsf	78	31.883	ENSCAFG00020025995	LRPPRC	79	31.887	Canis_lupus_dingo
FBgn0284256	bsf	68	33.368	ENSTSYG00000013197	LRPPRC	67	33.368	Carlito_syrichta
FBgn0284256	bsf	80	40.050	ENSCPBG00000005446	LRPPRC	78	40.050	Chrysemys_picta_bellii
FBgn0284256	bsf	78	32.332	ENSEASG00005003715	LRPPRC	82	32.155	Equus_asinus_asinus
FBgn0284256	bsf	78	32.332	ENSECAG00000023814	LRPPRC	75	32.332	Equus_caballus
FBgn0284256	bsf	68	32.824	ENSGALG00000009967	LRPPRC	68	32.923	Gallus_gallus
FBgn0284256	bsf	80	30.642	ENSGAGG00000020227	LRPPRC	79	30.366	Gopherus_agassizii
FBgn0284256	bsf	68	34.184	ENSMLEG00000043673	LRPPRC	78	42.651	Mandrillus_leucophaeus
FBgn0284256	bsf	70	32.129	ENSMGAG00000010201	LRPPRC	87	40.741	Meleagris_gallopavo
FBgn0284256	bsf	54	40.099	MGP_CAROLIEiJ_G0021927	Lrpprc	67	32.885	Mus_caroli
FBgn0284256	bsf	68	32.885	ENSMUSG00000024120	Lrpprc	67	32.885	Mus_musculus
FBgn0284256	bsf	78	30.817	MGP_PahariEiJ_G0020917	Lrpprc	67	32.989	Mus_pahari
FBgn0284256	bsf	68	32.851	MGP_SPRETEiJ_G0022843	Lrpprc	67	32.851	Mus_spretus
FBgn0284256	bsf	65	42.079	ENSPEMG00000022720	Lrpprc	67	33.164	Peromyscus_maniculatus_bairdii
FBgn0284256	bsf	79	31.496	ENSPCOG00000001309	LRPPRC	82	39.729	Propithecus_coquereli
FBgn0284256	bsf	74	32.170	ENSSPUG00000005188	LRPPRC	81	32.075	Sphenodon_punctatus
FBgn0284256	bsf	68	33.470	ENSUAMG00000022940	LRPPRC	67	33.470	Ursus_americanus
FBgn0284256	bsf	68	33.367	ENSUMAG00000012801	LRPPRC	73	33.368	Ursus_maritimus
FBgn0284256	bsf	78	31.871	ENSVVUG00000002339	LRPPRC	80	31.798	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003730	mRNA 3'-UTR binding	11313472.	IDA	Function
GO:0005737	cytoplasm	11313472.	IDA	Component
GO:0005739	mitochondrion	19317464.	HDA	Component
GO:0005739	mitochondrion	22022283.26176594.	IDA	Component
GO:0030018	Z disc	23118342.	IDA	Component
GO:0031426	polycistronic mRNA processing	22022283.	IMP	Process
GO:0031673	H zone	23118342.	IDA	Component
GO:0032981	mitochondrial respiratory chain complex I assembly	22022283.	IMP	Process
GO:0033617	mitochondrial respiratory chain complex IV assembly	22022283.	IMP	Process
GO:0034551	mitochondrial respiratory chain complex III assembly	22022283.	IMP	Process
GO:0044528	regulation of mitochondrial mRNA stability	26176594.	IMP	Process
GO:0070129	regulation of mitochondrial translation	22022283.	IMP	Process
GO:0097222	mitochondrial mRNA polyadenylation	22022283.	IMP	Process
GO:1903108	regulation of mitochondrial transcription	22022283.	IMP	Process
GO:1903862	positive regulation of oxidative phosphorylation	22022283.	IMP	Process