EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0285947 (Gene tree)
Gene ID: 32953
Gene Symbol: RpS10b
Alias: -
Full Name: Ribosomal protein S10b
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1776 bases
Position: chrX:19598031-19599806
Accession: FBgn0285947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0074500	S10_plectin	PF03501.15	2.9e-46	1	1
FBpp0074501	S10_plectin	PF03501.15	2.9e-46	1	1
FBpp0300512	S10_plectin	PF03501.15	2.9e-46	1	1
FBpp0310720	S10_plectin	PF03501.15	2.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0308192	-	809	-	FBpp0300512	160 (aa)	-	Q9VWG3
FBtr0074731	-	743	-	FBpp0074500	160 (aa)	-	Q9VWG3
FBtr0074732	-	1469	-	FBpp0074501	160 (aa)	-	Q9VWG3
FBtr0344339	-	651	-	FBpp0310720	160 (aa)	-	Q9VWG3

Gene Model

Click here to download FBgn0285947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0285947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0285947	RpS10b	99	71.250	FBgn0027494	RpS10a	98	74.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0285947	RpS10b	71	56.780	ENSAPOG00000014059	-	81	56.780	Acanthochromis_polyacanthus
FBgn0285947	RpS10b	59	64.211	ENSACIG00000013806	-	53	64.211	Amphilophus_citrinellus
FBgn0285947	RpS10b	59	58.947	ENSAOCG00000007730	-	56	58.947	Amphiprion_ocellaris
FBgn0285947	RpS10b	79	49.306	ENSAOCG00000011000	-	84	49.306	Amphiprion_ocellaris
FBgn0285947	RpS10b	75	54.032	ENSAPEG00000019531	-	69	54.032	Amphiprion_percula
FBgn0285947	RpS10b	57	50.549	ENSAPEG00000017745	-	59	50.549	Amphiprion_percula
FBgn0285947	RpS10b	68	51.754	ENSATEG00000004340	-	81	51.754	Anabas_testudineus
FBgn0285947	RpS10b	91	47.059	ENSACLG00000001013	-	85	47.059	Astatotilapia_calliptera
FBgn0285947	RpS10b	69	58.475	ENSAMXG00000037914	-	71	58.475	Astyanax_mexicanus
FBgn0285947	RpS10b	99	53.165	WBGene00004479	rps-10	97	53.165	Caenorhabditis_elegans
FBgn0285947	RpS10b	94	57.962	ENSCING00000006180	-	96	58.788	Ciona_intestinalis
FBgn0285947	RpS10b	81	50.000	ENSCSEG00000009179	-	86	50.000	Cynoglossus_semilaevis
FBgn0285947	RpS10b	60	54.639	ENSEBUG00000015221	-	63	54.639	Eptatretus_burgeri
FBgn0285947	RpS10b	91	50.340	ENSEASG00005009727	-	59	50.340	Equus_asinus_asinus
FBgn0285947	RpS10b	70	54.622	ENSECAG00000039725	-	57	54.622	Equus_caballus
FBgn0285947	RpS10b	59	61.053	ENSFHEG00000008769	-	59	61.053	Fundulus_heteroclitus
FBgn0285947	RpS10b	61	60.606	ENSGAFG00000001335	-	51	60.606	Gambusia_affinis
FBgn0285947	RpS10b	85	50.000	ENSHBUG00000023819	-	89	50.000	Haplochromis_burtoni
FBgn0285947	RpS10b	91	47.059	ENSHBUG00000018067	-	85	47.059	Haplochromis_burtoni
FBgn0285947	RpS10b	64	57.798	ENSLBEG00000020432	-	72	57.798	Labrus_bergylta
FBgn0285947	RpS10b	84	54.074	ENSLACG00000010998	-	76	54.074	Latimeria_chalumnae
FBgn0285947	RpS10b	66	55.140	ENSMAMG00000006622	-	51	55.140	Mastacembelus_armatus
FBgn0285947	RpS10b	85	50.676	ENSMZEG00005007838	-	89	50.676	Maylandia_zebra
FBgn0285947	RpS10b	91	47.059	ENSMZEG00005026198	-	85	47.059	Maylandia_zebra
FBgn0285947	RpS10b	64	56.604	ENSMMOG00000014380	-	55	56.604	Mola_mola
FBgn0285947	RpS10b	68	60.000	ENSMMOG00000003228	-	65	60.000	Mola_mola
FBgn0285947	RpS10b	68	55.046	ENSMALG00000015614	-	68	55.046	Monopterus_albus
FBgn0285947	RpS10b	91	47.059	ENSNBRG00000016554	-	85	47.059	Neolamprologus_brichardi
FBgn0285947	RpS10b	71	58.475	ENSNBRG00000008848	-	93	55.224	Neolamprologus_brichardi
FBgn0285947	RpS10b	61	63.000	ENSPKIG00000013061	-	55	63.000	Paramormyrops_kingsleyae
FBgn0285947	RpS10b	59	63.158	ENSPMGG00000017071	-	51	63.158	Periophthalmus_magnuspinnatus
FBgn0285947	RpS10b	97	47.771	ENSPMAG00000003064	-	95	47.771	Petromyzon_marinus
FBgn0285947	RpS10b	99	46.703	ENSPMAG00000010266	-	98	46.703	Petromyzon_marinus
FBgn0285947	RpS10b	84	49.286	ENSPLAG00000012690	-	80	49.286	Poecilia_latipinna
FBgn0285947	RpS10b	85	50.000	ENSPNYG00000012665	-	89	50.000	Pundamilia_nyererei
FBgn0285947	RpS10b	91	47.712	ENSPNYG00000006286	-	85	47.712	Pundamilia_nyererei
FBgn0285947	RpS10b	96	46.626	ENSPNAG00000021290	-	88	46.626	Pygocentrus_nattereri
FBgn0285947	RpS10b	65	55.769	YOR293W	RPS10A	97	55.769	Saccharomyces_cerevisiae
FBgn0285947	RpS10b	57	59.341	YMR230W	RPS10B	86	59.341	Saccharomyces_cerevisiae
FBgn0285947	RpS10b	79	50.000	ENSSFOG00015009603	-	84	46.154	Scleropages_formosus
FBgn0285947	RpS10b	64	61.905	ENSSFOG00015012004	-	59	61.905	Scleropages_formosus
FBgn0285947	RpS10b	73	50.000	ENSSDUG00000011052	-	81	50.000	Seriola_dumerili
FBgn0285947	RpS10b	59	63.158	ENSSDUG00000010997	-	57	63.158	Seriola_dumerili
FBgn0285947	RpS10b	71	56.780	ENSSLDG00000012473	-	76	56.780	Seriola_lalandi_dorsalis
FBgn0285947	RpS10b	84	45.833	ENSSLDG00000016257	-	82	45.833	Seriola_lalandi_dorsalis
FBgn0285947	RpS10b	83	46.324	ENSSPAG00000012512	-	71	46.324	Stegastes_partitus
FBgn0285947	RpS10b	77	51.613	ENSSPAG00000015615	-	85	51.613	Stegastes_partitus
FBgn0285947	RpS10b	61	61.224	ENSSSCG00000033521	-	97	47.170	Sus_scrofa
FBgn0285947	RpS10b	58	59.574	ENSXETG00000032983	-	73	52.518	Xenopus_tropicalis
FBgn0285947	RpS10b	71	55.932	ENSXCOG00000016917	-	73	55.932	Xiphophorus_couchianus
FBgn0285947	RpS10b	87	48.571	ENSXMAG00000029046	-	76	48.571	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	16889426.	IC	Process
GO:0002181	cytoplasmic translation	17927810.	TAS	Process
GO:0003735	structural constituent of ribosome	16889426.	HDA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005634	nucleus	24292889.	HDA	Component
GO:0022626	cytosolic ribosome	16889426.	HDA	Component
GO:0022627	cytosolic small ribosomal subunit	17927810.	TAS	Component