EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0015902 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 26342 bases
Position: chr1:32083383-32109724
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0019194	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_129S1SvImJ_P0019198	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0019198	-	4218	-	MGP_129S1SvImJ_P0019198	237 (aa)	-	-
MGP_129S1SvImJ_T0019199	-	1966	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0019194	-	4322	-	MGP_129S1SvImJ_P0019194	237 (aa)	-	-
MGP_129S1SvImJ_T0019195	-	4398	-	MGP_129S1SvImJ_P0019195	64 (aa)	-	-
MGP_129S1SvImJ_T0019196	-	2047	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0019197	-	1087	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0019200	-	437	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0019201	-	1764	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0019192	-	444	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0019193	-	2557	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0015902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0015902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0015902	Rab23	85	31.683	MGP_129S1SvImJ_G0027400	Rab25	92	31.683
MGP_129S1SvImJ_G0015902	Rab23	65	36.538	MGP_129S1SvImJ_G0035862	Rab39b	73	36.538
MGP_129S1SvImJ_G0015902	Rab23	70	34.337	MGP_129S1SvImJ_G0018064	Rab1a	81	34.337
MGP_129S1SvImJ_G0015902	Rab23	75	32.086	MGP_129S1SvImJ_G0029631	Rasl11b	74	32.086
MGP_129S1SvImJ_G0015902	Rab23	70	34.337	MGP_129S1SvImJ_G0024693	Rab1b	83	34.337
MGP_129S1SvImJ_G0015902	Rab23	61	31.507	MGP_129S1SvImJ_G0033214	Hras	98	30.332
MGP_129S1SvImJ_G0015902	Rab23	65	31.410	MGP_129S1SvImJ_G0031479	Kras	94	32.778
MGP_129S1SvImJ_G0015902	Rab23	75	32.961	MGP_129S1SvImJ_G0019371	Rab37	81	32.961
MGP_129S1SvImJ_G0015902	Rab23	74	37.500	MGP_129S1SvImJ_G0032514	Rab30	87	37.500
MGP_129S1SvImJ_G0015902	Rab23	80	30.890	MGP_129S1SvImJ_G0023979	Rab31	93	30.890
MGP_129S1SvImJ_G0015902	Rab23	64	38.462	MGP_129S1SvImJ_G0018768	Rab34	60	38.462
MGP_129S1SvImJ_G0015902	Rab23	66	39.873	MGP_129S1SvImJ_G0032574	Rab6a	76	39.873
MGP_129S1SvImJ_G0015902	Rab23	72	34.682	MGP_129S1SvImJ_G0019866	Rab15	81	34.682
MGP_129S1SvImJ_G0015902	Rab23	80	32.984	MGP_129S1SvImJ_G0034943	Rab11a	92	34.752
MGP_129S1SvImJ_G0015902	Rab23	65	33.766	MGP_129S1SvImJ_G0026959	Rab22a	79	33.766
MGP_129S1SvImJ_G0015902	Rab23	67	35.152	MGP_129S1SvImJ_G0027198	Rab33b	72	35.152
MGP_129S1SvImJ_G0015902	Rab23	77	38.172	MGP_129S1SvImJ_G0017350	Rab36	69	38.172
MGP_129S1SvImJ_G0015902	Rab23	65	36.129	MGP_129S1SvImJ_G0029356	Rheb	84	36.129
MGP_129S1SvImJ_G0015902	Rab23	77	31.383	MGP_129S1SvImJ_G0035694	Rab33a	79	31.383
MGP_129S1SvImJ_G0015902	Rab23	83	32.487	MGP_129S1SvImJ_G0028039	Rab2a	95	31.863
MGP_129S1SvImJ_G0015902	Rab23	80	33.508	MGP_129S1SvImJ_G0023535	Rab11b	97	35.417
MGP_129S1SvImJ_G0015902	Rab23	66	37.654	MGP_129S1SvImJ_G0036106	Rab9b	80	37.654
MGP_129S1SvImJ_G0015902	Rab23	69	35.119	MGP_129S1SvImJ_G0023988	Rab12	57	35.119
MGP_129S1SvImJ_G0015902	Rab23	74	35.227	MGP_129S1SvImJ_G0019167	Rab5c	81	35.227
MGP_129S1SvImJ_G0015902	Rab23	86	32.850	MGP_129S1SvImJ_G0021294	Rab2b	94	32.850
MGP_129S1SvImJ_G0015902	Rab23	70	33.918	MGP_129S1SvImJ_G0031005	Rab7	94	43.478
MGP_129S1SvImJ_G0015902	Rab23	67	38.125	MGP_129S1SvImJ_G0023887	Rab5a	74	38.125
MGP_129S1SvImJ_G0015902	Rab23	70	34.337	MGP_129S1SvImJ_G0025650	Rab14	88	35.338
MGP_129S1SvImJ_G0015902	Rab23	61	32.192	MGP_129S1SvImJ_G0027689	Nras	95	35.862
MGP_129S1SvImJ_G0015902	Rab23	72	35.465	MGP_129S1SvImJ_G0024132	Rab18	83	35.465
MGP_129S1SvImJ_G0015902	Rab23	66	41.139	MGP_129S1SvImJ_G0035193	Rab6b	76	41.139
MGP_129S1SvImJ_G0015902	Rab23	68	33.129	MGP_129S1SvImJ_G0031586	Rasl2-9	74	33.129
MGP_129S1SvImJ_G0015902	Rab23	67	31.765	MGP_129S1SvImJ_G0030380	Rasl11a	69	31.765