EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0015950 (Gene tree)
Gene ID: -
Gene Symbol: Aff3
Alias: 3222402O04Rik|A730046J16|LAF-4|Laf4
Full Name: AF4/FMR2 family%2C member 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 495591 bases
Position: chr1:36843514-37339104
Accession: 106927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0019482	AF-4	PF05110.13	0	1	2
MGP_129S1SvImJ_P0019482	AF-4	PF05110.13	0	2	2
MGP_129S1SvImJ_P0019483	AF-4	PF05110.13	0	1	2
MGP_129S1SvImJ_P0019483	AF-4	PF05110.13	0	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0019482	-	5857	XM_006495737	MGP_129S1SvImJ_P0019482	1229 (aa)	XP_006495800	D3YYI6
MGP_129S1SvImJ_T0019483	-	6010	-	MGP_129S1SvImJ_P0019483	1228 (aa)	-	-
MGP_129S1SvImJ_T0019486	-	1646	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0019487	-	665	-	MGP_129S1SvImJ_P0019487	53 (aa)	-	-
MGP_129S1SvImJ_T0019484	-	3765	-	MGP_129S1SvImJ_P0019484	1254 (aa)	-	-
MGP_129S1SvImJ_T0019485	-	761	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0015950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0015950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0015950	Aff3	89	60.000	MGP_129S1SvImJ_G0035774	Aff2	84	57.037
MGP_129S1SvImJ_G0015950	Aff3	83	35.742	MGP_129S1SvImJ_G0018289	Aff4	74	57.143