EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0016146 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|AI854243|Brp17|Kiaa1184|MNCb-5687|MR-1|Mr1|Tahccp2
Full Name: paroxysmal nonkinesiogenic dyskinesia
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 74692 bases
Position: chr1:74872875-74947566
Accession: 1930773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0020500	Lactamase_B	PF00753.27	2.5e-10	1	1
MGP_129S1SvImJ_P0020487	Lactamase_B	PF00753.27	2.9e-10	1	1
MGP_129S1SvImJ_P0020490	Lactamase_B	PF00753.27	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0020501	-	3599	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0020500	-	2859	-	MGP_129S1SvImJ_P0020500	360 (aa)	-	-
MGP_129S1SvImJ_T0020491	-	416	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0020490	-	3054	-	MGP_129S1SvImJ_P0020490	424 (aa)	-	-
MGP_129S1SvImJ_T0020488	-	882	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0020489	-	435	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0020486	-	740	XM_006496167	MGP_129S1SvImJ_P0020486	142 (aa)	XP_006496230	Q69ZP3
MGP_129S1SvImJ_T0020487	-	2937	-	MGP_129S1SvImJ_P0020487	385 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0016146	Pnkd	63	42.105	MGP_129S1SvImJ_G0023366	Haghl	100	40.351
MGP_129S1SvImJ_G0016146	Pnkd	74	40.602	MGP_129S1SvImJ_G0023325	Hagh	96	43.478