EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0016342 (Gene tree)
Gene ID: -
Gene Symbol: Hdlbp
Alias: 1110005P14Rik|AA960365|AI118566|D1Ertd101e
Full Name: high density lipoprotein (HDL) binding protein
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 73708 bases
Position: chr1:95030987-95104694
Accession: 99256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	1	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	2	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	3	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	4	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	5	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	6	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	7	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	8	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	9	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	10	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	11	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	12	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	13	14
MGP_129S1SvImJ_P0021470	KH_1	PF00013.29	2.2e-186	14	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	1	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	2	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	3	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	4	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	5	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	6	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	7	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	8	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	9	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	10	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	11	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	12	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	13	14
MGP_129S1SvImJ_P0021471	KH_1	PF00013.29	2.2e-186	14	14
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	1	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	2	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	3	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	4	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	5	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	6	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	7	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	8	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	9	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	10	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	11	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	12	13
MGP_129S1SvImJ_P0021472	KH_1	PF00013.29	4.5e-175	13	13
MGP_129S1SvImJ_P0021475	KH_1	PF00013.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0021470	-	6231	XM_006529074	MGP_129S1SvImJ_P0021470	1268 (aa)	XP_006529137	Q8VDJ3
MGP_129S1SvImJ_T0021471	-	4427	-	MGP_129S1SvImJ_P0021471	1268 (aa)	-	-
MGP_129S1SvImJ_T0021472	-	3808	-	MGP_129S1SvImJ_P0021472	1199 (aa)	-	-
MGP_129S1SvImJ_T0021473	-	2172	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0021474	-	528	-	MGP_129S1SvImJ_P0021474	22 (aa)	-	-
MGP_129S1SvImJ_T0021475	-	740	-	MGP_129S1SvImJ_P0021475	178 (aa)	-	-
MGP_129S1SvImJ_T0021476	-	671	-	MGP_129S1SvImJ_P0021476	141 (aa)	-	-
MGP_129S1SvImJ_T0021477	-	850	-	MGP_129S1SvImJ_P0021477	129 (aa)	-	-
MGP_129S1SvImJ_T0021478	-	630	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0021479	-	341	-	MGP_129S1SvImJ_P0021479	22 (aa)	-	-
MGP_129S1SvImJ_T0021480	-	3237	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0016342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0016342	Hdlbp	91	46.008	MGP_129S1SvImJ_G0036050	4921511C20Rik	100	46.008
MGP_129S1SvImJ_G0016342	Hdlbp	94	50.165	MGP_129S1SvImJ_G0036049	Gm382	95	50.165