EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0016412 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 13839 bases
Position: chr1:124394760-124408598
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0021795	ResIII	PF04851.15	4.6e-06	1	1
MGP_129S1SvImJ_P0021795	DEAD	PF00270.29	1.7e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0021795	-	1983	XM_006529794	MGP_129S1SvImJ_P0021795	660 (aa)	XP_006529857	Q8K363
MGP_129S1SvImJ_T0021797	-	512	-	MGP_129S1SvImJ_P0021797	170 (aa)	-	-
MGP_129S1SvImJ_T0021796	-	622	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0021798	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0016412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0016412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0016412	Ddx18	56	36.148	MGP_129S1SvImJ_G0033699	Ddx49	92	38.066
MGP_129S1SvImJ_G0016412	Ddx18	52	33.333	MGP_129S1SvImJ_G0022077	Ddx17	53	33.333
MGP_129S1SvImJ_G0016412	Ddx18	68	36.326	MGP_129S1SvImJ_G0030100	Ddx55	77	36.326
MGP_129S1SvImJ_G0016412	Ddx18	55	38.420	MGP_129S1SvImJ_G0031412	Ddx47	89	37.602
MGP_129S1SvImJ_G0016412	Ddx18	61	38.462	MGP_129S1SvImJ_G0026906	Ddx27	53	38.221
MGP_129S1SvImJ_G0016412	Ddx18	64	32.294	MGP_129S1SvImJ_G0030009	Ddx54	50	32.366
MGP_129S1SvImJ_G0016412	Ddx18	55	32.990	MGP_129S1SvImJ_G0018863	Ddx52	68	31.935
MGP_129S1SvImJ_G0016412	Ddx18	53	33.144	MGP_129S1SvImJ_G0016541	Ddx59	55	33.144
MGP_129S1SvImJ_G0016412	Ddx18	50	33.134	MGP_129S1SvImJ_G0019313	Ddx5	74	31.699
MGP_129S1SvImJ_G0016412	Ddx18	51	30.769	MGP_129S1SvImJ_G0033839	Ddx39	77	30.769
MGP_129S1SvImJ_G0016412	Ddx18	57	34.351	MGP_129S1SvImJ_G0017303	Ddx50	61	32.867
MGP_129S1SvImJ_G0016412	Ddx18	65	36.327	MGP_129S1SvImJ_G0025533	Ddx31	72	36.327
MGP_129S1SvImJ_G0016412	Ddx18	53	33.155	MGP_129S1SvImJ_G0035571	Ddx3x	56	33.155
MGP_129S1SvImJ_G0016412	Ddx18	56	34.974	MGP_129S1SvImJ_G0035068	Ddx43	55	34.974
MGP_129S1SvImJ_G0016412	Ddx18	50	34.111	MGP_129S1SvImJ_G0020602	Ddx41	54	34.111
MGP_129S1SvImJ_G0016412	Ddx18	66	46.241	MGP_129S1SvImJ_G0034807	Ddx10	50	46.241
MGP_129S1SvImJ_G0016412	Ddx18	53	33.155	MGP_129S1SvImJ_G0016921	D1Pas1	56	33.155
MGP_129S1SvImJ_G0016412	Ddx18	50	30.699	MGP_129S1SvImJ_G0034714	Ddx6	66	30.699