EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0016488 (Gene tree)
Gene ID: -
Gene Symbol: Snrpe
Alias: AL022645|C76690|SME
Full Name: small nuclear ribonucleoprotein E
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 6628 bases
Position: chr1:137196497-137203124
Accession: 98346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0022149	LSM	PF01423.22	2.1e-17	1	1
MGP_129S1SvImJ_P0022151	LSM	PF01423.22	8.9e-12	1	1
MGP_129S1SvImJ_P0022152	LSM	PF01423.22	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0022152	-	75	-	MGP_129S1SvImJ_P0022152	25 (aa)	-	-
MGP_129S1SvImJ_T0022153	-	597	-	MGP_129S1SvImJ_P0022153	69 (aa)	-	-
MGP_129S1SvImJ_T0022150	-	653	-	MGP_129S1SvImJ_P0022150	69 (aa)	-	-
MGP_129S1SvImJ_T0022151	-	669	-	MGP_129S1SvImJ_P0022151	91 (aa)	-	-
MGP_129S1SvImJ_T0022149	-	709	-	MGP_129S1SvImJ_P0022149	92 (aa)	-	P62305

Gene Model

Click here to download MGP_129S1SvImJ_G0016488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0016488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0016488	Snrpe	77	32.877	MGP_129S1SvImJ_G0030779	Lsm5	76	32.877