EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0017212 (Gene tree)
Gene ID: -
Gene Symbol: Ascc3
Alias: ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 283061 bases
Position: chr10:49661810-49944870
Accession: 1925237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0025169	ResIII	PF04851.15	2.3e-26	1	2
MGP_129S1SvImJ_P0025169	ResIII	PF04851.15	2.3e-26	2	2
MGP_129S1SvImJ_P0025169	DEAD	PF00270.29	2.7e-53	1	2
MGP_129S1SvImJ_P0025169	DEAD	PF00270.29	2.7e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0025170	-	7453	-	MGP_129S1SvImJ_P0025170	2198 (aa)	-	-
MGP_129S1SvImJ_T0025169	-	7477	XM_006512923	MGP_129S1SvImJ_P0025169	2198 (aa)	XP_006512986	E9PZJ8

Gene Model

Click here to download MGP_129S1SvImJ_G0017212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0017212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0017212	Ascc3	62	35.940	MGP_129S1SvImJ_G0029832	Hfm1	51	35.940
MGP_129S1SvImJ_G0017212	Ascc3	81	44.301	MGP_129S1SvImJ_G0026452	Snrnp200	86	42.051