EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0017390 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 207302 bases
Position: chr10:77025467-77232768
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0025859	KH_1	PF00013.29	2.9e-55	1	3
MGP_129S1SvImJ_P0025859	KH_1	PF00013.29	2.9e-55	2	3
MGP_129S1SvImJ_P0025859	KH_1	PF00013.29	2.9e-55	3	3
MGP_129S1SvImJ_P0025856	KH_1	PF00013.29	3e-55	1	3
MGP_129S1SvImJ_P0025856	KH_1	PF00013.29	3e-55	2	3
MGP_129S1SvImJ_P0025856	KH_1	PF00013.29	3e-55	3	3
MGP_129S1SvImJ_P0025858	KH_1	PF00013.29	3e-55	1	3
MGP_129S1SvImJ_P0025858	KH_1	PF00013.29	3e-55	2	3
MGP_129S1SvImJ_P0025858	KH_1	PF00013.29	3e-55	3	3
MGP_129S1SvImJ_P0025861	KH_1	PF00013.29	7.7e-19	1	1
MGP_129S1SvImJ_P0025859	KH_2	PF07650.17	3.9e-15	1	1
MGP_129S1SvImJ_P0025856	KH_2	PF07650.17	3.9e-15	1	1
MGP_129S1SvImJ_P0025858	KH_2	PF07650.17	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0025863	-	717	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0025862	-	944	-	MGP_129S1SvImJ_P0025862	226 (aa)	-	-
MGP_129S1SvImJ_T0025861	-	605	-	MGP_129S1SvImJ_P0025861	160 (aa)	-	-
MGP_129S1SvImJ_T0025860	-	1095	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0025864	-	337	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0025856	-	2013	-	MGP_129S1SvImJ_P0025856	371 (aa)	-	-
MGP_129S1SvImJ_T0025857	-	1736	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0025855	-	2388	XM_006513916	MGP_129S1SvImJ_P0025855	394 (aa)	XP_006513979	P57722
MGP_129S1SvImJ_T0025858	-	1748	-	MGP_129S1SvImJ_P0025858	371 (aa)	-	-
MGP_129S1SvImJ_T0025859	-	2544	-	MGP_129S1SvImJ_P0025859	370 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0017390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0017390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0017390	Pcbp3	66	33.582	MGP_129S1SvImJ_G0018993	Igf2bp1	60	33.333
MGP_129S1SvImJ_G0017390	Pcbp3	86	35.000	MGP_129S1SvImJ_G0030721	Igf2bp3	59	33.813
MGP_129S1SvImJ_G0017390	Pcbp3	79	41.667	MGP_129S1SvImJ_G0020633	Hnrnpk	70	51.316
MGP_129S1SvImJ_G0017390	Pcbp3	99	82.143	MGP_129S1SvImJ_G0022415	Pcbp2	99	78.338
MGP_129S1SvImJ_G0017390	Pcbp3	85	69.792	MGP_129S1SvImJ_G0035232	Pcbp4	93	70.652
MGP_129S1SvImJ_G0017390	Pcbp3	89	36.765	MGP_129S1SvImJ_G0022666	Igf2bp2	62	33.333
MGP_129S1SvImJ_G0017390	Pcbp3	85	31.973	MGP_129S1SvImJ_G0025586	Fubp3	77	31.973
MGP_129S1SvImJ_G0017390	Pcbp3	99	65.873	MGP_129S1SvImJ_G0030978	Pcbp1	99	68.033
MGP_129S1SvImJ_G0017390	Pcbp3	72	40.351	MGP_129S1SvImJ_G0019714	Nova1	59	40.351
MGP_129S1SvImJ_G0017390	Pcbp3	79	30.337	MGP_129S1SvImJ_G0032452	-	78	30.337
MGP_129S1SvImJ_G0017390	Pcbp3	66	31.250	MGP_129S1SvImJ_G0027988	Fubp1	72	33.019