EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0017560 (Gene tree)
Gene ID: -
Gene Symbol: Celf5
Alias: 4930565A21Rik|Brunol5
Full Name: CUGBP%2C Elav-like family member 5
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 28087 bases
Position: chr10:82180418-82208504
Accession: 2442333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0026491	RRM_1	PF00076.22	2.2e-31	1	2
MGP_129S1SvImJ_P0026491	RRM_1	PF00076.22	2.2e-31	2	2
MGP_129S1SvImJ_P0026489	RRM_1	PF00076.22	2.2e-31	1	2
MGP_129S1SvImJ_P0026489	RRM_1	PF00076.22	2.2e-31	2	2
MGP_129S1SvImJ_P0026495	RRM_1	PF00076.22	2.9e-16	1	1
MGP_129S1SvImJ_P0026490	RRM_1	PF00076.22	2.3e-15	1	1
MGP_129S1SvImJ_P0026488	RRM_1	PF00076.22	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0026488	-	4156	XM_006513743	MGP_129S1SvImJ_P0026488	319 (aa)	XP_006513806	D3Z4C5
MGP_129S1SvImJ_T0026489	-	4379	-	MGP_129S1SvImJ_P0026489	395 (aa)	-	-
MGP_129S1SvImJ_T0026493	-	945	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0026492	-	605	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0026491	-	2042	-	MGP_129S1SvImJ_P0026491	394 (aa)	-	-
MGP_129S1SvImJ_T0026490	-	3861	-	MGP_129S1SvImJ_P0026490	318 (aa)	-	-
MGP_129S1SvImJ_T0026495	-	442	-	MGP_129S1SvImJ_P0026495	92 (aa)	-	-
MGP_129S1SvImJ_T0026494	-	748	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0017560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0017560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0017560	Celf5	91	31.765	MGP_129S1SvImJ_G0034474	Elavl3	52	30.000
MGP_129S1SvImJ_G0017560	Celf5	93	76.744	MGP_129S1SvImJ_G0027553	Celf3	100	67.213
MGP_129S1SvImJ_G0017560	Celf5	89	32.184	MGP_129S1SvImJ_G0030975	Tia1	71	32.836
MGP_129S1SvImJ_G0017560	Celf5	93	56.322	MGP_129S1SvImJ_G0026137	Celf1	77	37.292
MGP_129S1SvImJ_G0017560	Celf5	93	76.842	MGP_129S1SvImJ_G0024209	Celf4	84	63.333
MGP_129S1SvImJ_G0017560	Celf5	88	34.524	MGP_129S1SvImJ_G0027606	Sf3b4	53	30.043
MGP_129S1SvImJ_G0017560	Celf5	93	80.645	MGP_129S1SvImJ_G0034902	Celf6	75	85.401
MGP_129S1SvImJ_G0017560	Celf5	93	59.770	MGP_129S1SvImJ_G0025332	Celf2	92	53.659