EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0017954 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 20082 bases
Position: chr11:138406-158487
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0027669	zf-C2H2	PF00096.26	3.9e-26	1	5
MGP_129S1SvImJ_P0027669	zf-C2H2	PF00096.26	3.9e-26	2	5
MGP_129S1SvImJ_P0027669	zf-C2H2	PF00096.26	3.9e-26	3	5
MGP_129S1SvImJ_P0027669	zf-C2H2	PF00096.26	3.9e-26	4	5
MGP_129S1SvImJ_P0027669	zf-C2H2	PF00096.26	3.9e-26	5	5
MGP_129S1SvImJ_P0027672	zf-C2H2	PF00096.26	5e-20	1	4
MGP_129S1SvImJ_P0027672	zf-C2H2	PF00096.26	5e-20	2	4
MGP_129S1SvImJ_P0027672	zf-C2H2	PF00096.26	5e-20	3	4
MGP_129S1SvImJ_P0027672	zf-C2H2	PF00096.26	5e-20	4	4
MGP_129S1SvImJ_P0027671	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_129S1SvImJ_P0027671	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_129S1SvImJ_P0027671	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_129S1SvImJ_P0027669	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0027670	-	1904	-	MGP_129S1SvImJ_P0027670	102 (aa)	-	-
MGP_129S1SvImJ_T0027671	-	2930	-	MGP_129S1SvImJ_P0027671	537 (aa)	-	-
MGP_129S1SvImJ_T0027672	-	3118	-	MGP_129S1SvImJ_P0027672	641 (aa)	-	-
MGP_129S1SvImJ_T0027673	-	1249	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0027667	-	1853	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0027666	-	798	NR_045109	-	- (aa)	-	-
MGP_129S1SvImJ_T0027676	-	495	-	MGP_129S1SvImJ_P0027676	70 (aa)	-	-
MGP_129S1SvImJ_T0027674	-	456	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0027669	-	2903	-	MGP_129S1SvImJ_P0027669	687 (aa)	-	-
MGP_129S1SvImJ_T0027668	-	844	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0027675	-	652	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0017954	Patz1	82	37.895	MGP_129S1SvImJ_G0023997	Zbtb14	90	38.889