EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0018207 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 9689 bases
Position: chr11:47893178-47902866
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0028739	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_129S1SvImJ_P0028738	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0028738	-	2259	-	MGP_129S1SvImJ_P0028738	409 (aa)	-	-
MGP_129S1SvImJ_T0028739	-	1213	-	MGP_129S1SvImJ_P0028739	288 (aa)	-	-
MGP_129S1SvImJ_T0028737	-	3832	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0018207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0018207's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0018207	Irgm1	76	35.169	MGP_129S1SvImJ_G0031828	Irgc1	71	30.183
MGP_129S1SvImJ_G0018207	Irgm1	83	38.367	MGP_129S1SvImJ_G0018212	-	72	31.909
MGP_129S1SvImJ_G0018207	Irgm1	82	39.095	MGP_129S1SvImJ_G0018215	Tgtp2	72	36.667
MGP_129S1SvImJ_G0018207	Irgm1	89	31.937	MGP_129S1SvImJ_G0018216	Ifi47	91	31.937
MGP_129S1SvImJ_G0018207	Irgm1	83	62.185	MGP_129S1SvImJ_G0018346	Irgm2	92	50.135
MGP_129S1SvImJ_G0018207	Irgm1	89	56.031	MGP_129S1SvImJ_G0018345	Igtp	90	49.740
MGP_129S1SvImJ_G0018207	Irgm1	83	38.367	MGP_129S1SvImJ_G0018211	-	72	31.909
MGP_129S1SvImJ_G0018207	Irgm1	83	38.367	MGP_129S1SvImJ_G0018208	-	73	31.909
MGP_129S1SvImJ_G0018207	Irgm1	65	39.175	MGP_129S1SvImJ_G0024459	F830016B08Rik	72	34.000
MGP_129S1SvImJ_G0018207	Irgm1	79	36.864	MGP_129S1SvImJ_G0024458	Gm4951	77	33.013